Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RN7SL738P-201ENST00000470264 297 ntBASIC5.45□□□□□ -1.54
VTNP04004 RN7SL205P-201ENST00000490174 284 ntBASIC5.45□□□□□ -1.54
VTNP04004 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.45□□□□□ -1.54
VTNP04004 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.45□□□□□ -1.54
VTNP04004 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.45□□□□□ -1.54
VTNP04004 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.45□□□□□ -1.54
VTNP04004 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.45□□□□□ -1.54
VTNP04004 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.45□□□□□ -1.54
VTNP04004 AC091042.1-201ENST00000579213 173 ntBASIC5.45□□□□□ -1.54
VTNP04004 RN7SL52P-201ENST00000584271 284 ntBASIC5.45□□□□□ -1.54
VTNP04004 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.45□□□□□ -1.54
VTNP04004 AC100814.1-201ENST00000606963 623 ntBASIC5.45□□□□□ -1.54
VTNP04004 SNORA35B-201ENST00000607417 129 ntBASIC5.45□□□□□ -1.54
VTNP04004 RN7SL722P-201ENST00000617780 284 ntBASIC5.45□□□□□ -1.54
VTNP04004 RN7SL565P-201ENST00000618246 284 ntBASIC5.45□□□□□ -1.54
VTNP04004 AC026367.3-201ENST00000619032 590 ntBASIC5.45□□□□□ -1.54
VTNP04004 AC019206.1-201ENST00000621938 425 ntBASIC5.45□□□□□ -1.54
VTNP04004 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.45□□□□□ -1.54
VTNP04004 AC112198.2-201ENST00000426589 6996 ntBASIC5.45□□□□□ -1.54
VTNP04004 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
VTNP04004 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VTNP04004 ZNF652P1-201ENST00000442420 1309 ntBASIC5.45□□□□□ -1.54
VTNP04004 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VTNP04004 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 SAMM50P1-201ENST00000455403 1399 ntBASIC5.44□□□□□ -1.54
VTNP04004 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VTNP04004 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VTNP04004 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 AL590139.1-201ENST00000416267 400 ntBASIC5.44□□□□□ -1.54
VTNP04004 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.44□□□□□ -1.54
VTNP04004 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.44□□□□□ -1.54
VTNP04004 OR2B7P-201ENST00000429302 934 ntBASIC5.44□□□□□ -1.54
VTNP04004 RPL36AP15-201ENST00000444514 266 ntBASIC5.44□□□□□ -1.54
VTNP04004 OR1H1P-201ENST00000448731 937 ntBASIC5.44□□□□□ -1.54
VTNP04004 AC234781.3-201ENST00000452540 973 ntBASIC5.44□□□□□ -1.54
VTNP04004 GYG1P1-201ENST00000460864 698 ntBASIC5.44□□□□□ -1.54
VTNP04004 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.44□□□□□ -1.54
VTNP04004 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.44□□□□□ -1.54
VTNP04004 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.44□□□□□ -1.54
VTNP04004 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.44□□□□□ -1.54
VTNP04004 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 AP001880.2-201ENST00000538233 448 ntBASIC5.44□□□□□ -1.54
VTNP04004 AL512310.9-201ENST00000553311 948 ntBASIC5.44□□□□□ -1.54
VTNP04004 TVP23CP2-201ENST00000571473 623 ntBASIC5.44□□□□□ -1.54
VTNP04004 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.44□□□□□ -1.54
VTNP04004 AC138473.1-201ENST00000605717 526 ntBASIC5.44□□□□□ -1.54
VTNP04004 AL353684.1-201ENST00000622677 1120 ntBASIC5.44□□□□□ -1.54
VTNP04004 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.44□□□□□ -1.54
VTNP04004 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
VTNP04004 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
VTNP04004 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VTNP04004 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTNP04004 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.43□□□□□ -1.54
VTNP04004 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTNP04004 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.43□□□□□ -1.54
VTNP04004 AC093671.1-201ENST00000624981 2929 ntBASIC5.43□□□□□ -1.54
VTNP04004 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VTNP04004 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VTNP04004 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VTNP04004 MIR192-201ENST00000384915 110 ntBASIC5.43□□□□□ -1.54
VTNP04004 AL357515.1-201ENST00000402967 542 ntBASIC5.43□□□□□ -1.54
VTNP04004 NACAP7-201ENST00000407371 609 ntBASIC5.43□□□□□ -1.54
VTNP04004 TBCAP2-201ENST00000416175 326 ntBASIC5.43□□□□□ -1.54
VTNP04004 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 SCAND3P1-201ENST00000439854 1060 ntBASIC5.43□□□□□ -1.54
VTNP04004 RPL7AP61-201ENST00000443410 636 ntBASIC5.43□□□□□ -1.54
VTNP04004 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.43□□□□□ -1.54
VTNP04004 AURKAPS2-201ENST00000454983 333 ntBASIC5.43□□□□□ -1.54
VTNP04004 AC116562.1-201ENST00000485355 781 ntBASIC5.43□□□□□ -1.54
VTNP04004 NIFKP7-201ENST00000503365 834 ntBASIC5.43□□□□□ -1.54
VTNP04004 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.43□□□□□ -1.54
VTNP04004 AC016559.2-201ENST00000510759 359 ntBASIC5.43□□□□□ -1.54
VTNP04004 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.43□□□□□ -1.54
VTNP04004 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.43□□□□□ -1.54
VTNP04004 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.43□□□□□ -1.54
VTNP04004 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VTNP04004 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms