Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TP63-207ENST00000418709 2810 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC007342.7-201ENST00000624610 2337 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 Y_RNA.409-201ENST00000383990 98 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 U3.52-201ENST00000384034 216 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 RPL5P34-201ENST00000426545 891 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 RPSAP65-201ENST00000429660 595 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC016691.1-201ENST00000441321 413 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AL022237.1-201ENST00000446663 358 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 OR52I1-201ENST00000450052 1050 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 Z82190.1-201ENST00000454534 490 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 ARPC3P2-201ENST00000457786 533 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 snoU109.1-201ENST00000459339 135 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 RPS20P4-201ENST00000461659 355 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 RPL7AP23-201ENST00000482625 776 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 NIFKP7-201ENST00000503365 834 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 NDUFB4P2-201ENST00000509515 391 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 KCTD9P4-201ENST00000526766 1166 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 NANOGNBP2-201ENST00000544753 553 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC008055.1-201ENST00000547032 609 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC110588.1-201ENST00000559699 137 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 MIR3614-201ENST00000581261 86 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC019193.3-201ENST00000609144 554 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 AC007342.8-201ENST00000623278 678 ntBASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
ALDH1A1P00352 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
ALDH1A1P00352 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.84□□□□□ -1.16
ALDH1A1P00352 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.16
ALDH1A1P00352 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
ALDH1A1P00352 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
ALDH1A1P00352 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 CUL4AP1-201ENST00000514750 1863 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
ALDH1A1P00352 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ALDH1A1P00352 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
ALDH1A1P00352 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 RPL21P132-201ENST00000331267 462 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 RN7SKP69-201ENST00000365390 305 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 RPL24P7-201ENST00000399435 453 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 HMGB3P20-201ENST00000417997 600 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 OR1AA1P-201ENST00000419597 916 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 PTP4A1P1-201ENST00000420539 515 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
ALDH1A1P00352 OFD1P12Y-201ENST00000427963 1207 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 HMGB1P16-201ENST00000447155 540 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 MTND6P2-201ENST00000512226 524 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 YWHABP2-201ENST00000540201 713 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 ELOCP31-201ENST00000540463 467 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 MIR3135A-201ENST00000578460 77 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 MIR4503-201ENST00000582187 83 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC007687.1-201ENST00000602704 304 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC091488.1-201ENST00000604239 660 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 SUGT1P3-202ENST00000604259 383 ntBASIC7.83□□□□□ -1.16
ALDH1A1P00352 AC010200.2-201ENST00000605098 235 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms