Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 RBMS2P1-201ENST00000525031 1226 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AC025260.1-201ENST00000548858 430 ntBASIC8.06□□□□□ -1.12
RNF40O75150 SNRPGP18-201ENST00000553000 214 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AC090236.2-201ENST00000587933 1101 ntBASIC8.06□□□□□ -1.12
RNF40O75150 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 AC011497.2-201ENST00000600255 639 ntBASIC8.06□□□□□ -1.12
RNF40O75150 CKS1BP3-201ENST00000600888 237 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC023206.1-201ENST00000605824 298 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC012603.1-201ENST00000606424 528 ntBASIC8.06□□□□□ -1.12
RNF40O75150 BX323046.1-201ENST00000610145 535 ntBASIC8.06□□□□□ -1.12
RNF40O75150 PART1_3.1-201ENST00000619680 131 ntBASIC8.06□□□□□ -1.12
RNF40O75150 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 AL353898.2-201ENST00000623000 255 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC005618.4-201ENST00000625053 554 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 VEZF1P1-201ENST00000423931 1541 ntBASIC8.06□□□□□ -1.12
RNF40O75150 AC092821.3-202ENST00000641304 2767 ntBASIC8.06□□□□□ -1.12
RNF40O75150 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8.06□□□□□ -1.12
RNF40O75150 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.06□□□□□ -1.12
RNF40O75150 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
RNF40O75150 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 SPATA2P1-201ENST00000431223 2055 ntBASIC8.06□□□□□ -1.12
RNF40O75150 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
RNF40O75150 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
RNF40O75150 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
RNF40O75150 Y_RNA.197-201ENST00000364004 102 ntBASIC8.05□□□□□ -1.12
RNF40O75150 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 NFIB-202ENST00000380924 840 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 SNORA10-201ENST00000384084 133 ntBASIC8.05□□□□□ -1.12
RNF40O75150 SNORA51.7-201ENST00000384171 134 ntBASIC8.05□□□□□ -1.12
RNF40O75150 RNU6-308P-201ENST00000390957 107 ntBASIC8.05□□□□□ -1.12
RNF40O75150 CISD1P1-201ENST00000393907 327 ntBASIC8.05□□□□□ -1.12
RNF40O75150 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 AC092952.1-201ENST00000397646 1209 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL080285.1-201ENST00000404225 984 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL390316.1-201ENST00000406279 553 ntBASIC8.05□□□□□ -1.12
RNF40O75150 RN7SKP261-201ENST00000410948 278 ntBASIC8.05□□□□□ -1.12
RNF40O75150 MTATP6P18-201ENST00000417994 673 ntBASIC8.05□□□□□ -1.12
RNF40O75150 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 FTH1P5-201ENST00000425761 545 ntBASIC8.05□□□□□ -1.12
RNF40O75150 RPS27AP6-201ENST00000427962 448 ntBASIC8.05□□□□□ -1.12
RNF40O75150 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF40O75150 CBX1P1-201ENST00000440184 427 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL353093.1-201ENST00000441292 436 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 ARL2BPP7-201ENST00000446421 490 ntBASIC8.05□□□□□ -1.12
RNF40O75150 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 RPL26P28-201ENST00000451325 435 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 RPL34P22-201ENST00000468193 318 ntBASIC8.05□□□□□ -1.12
RNF40O75150 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 RN7SL705P-201ENST00000481678 294 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC006390.1-201ENST00000508068 283 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 AC105417.1-201ENST00000514691 285 ntBASIC8.05□□□□□ -1.12
RNF40O75150 MTND5P4-201ENST00000514978 288 ntBASIC8.05□□□□□ -1.12
RNF40O75150 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF40O75150 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF40O75150 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 AC009729.1-201ENST00000548873 1133 ntBASIC8.05□□□□□ -1.12
RNF40O75150 TRAV15-201ENST00000556680 249 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC8.05□□□□□ -1.12
RNF40O75150 MT1L-202ENST00000566367 78 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 AC090415.1-201ENST00000581877 847 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC010525.2-201ENST00000590920 195 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AC068631.1-229ENST00000599314 739 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms