Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC134698.5-201ENST00000519444 336 ntBASIC4.97□□□□□ -1.61
SNX3O60493 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX3O60493 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX3O60493 AC079905.1-201ENST00000549280 475 ntBASIC4.97□□□□□ -1.61
SNX3O60493 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX3O60493 RPL21P7-201ENST00000557463 483 ntBASIC4.97□□□□□ -1.61
SNX3O60493 CYCSP38-201ENST00000559840 322 ntBASIC4.97□□□□□ -1.61
SNX3O60493 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.97□□□□□ -1.61
SNX3O60493 RBM22P12-201ENST00000567098 1255 ntBASIC4.97□□□□□ -1.61
SNX3O60493 MIR4502-201ENST00000580432 81 ntBASIC4.97□□□□□ -1.61
SNX3O60493 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.97□□□□□ -1.61
SNX3O60493 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.97□□□□□ -1.61
SNX3O60493 AC087283.1-201ENST00000604029 1074 ntBASIC4.97□□□□□ -1.61
SNX3O60493 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 CR589904.2-201ENST00000612533 440 ntBASIC4.97□□□□□ -1.61
SNX3O60493 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 AC140113.4-201ENST00000622087 222 ntBASIC4.97□□□□□ -1.61
SNX3O60493 AC007603.3-201ENST00000636915 979 ntBASIC4.97□□□□□ -1.61
SNX3O60493 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.97□□□□□ -1.61
SNX3O60493 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SNX3O60493 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SNX3O60493 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SNX3O60493 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SNX3O60493 AC092747.4-201ENST00000620519 1861 ntBASIC4.96□□□□□ -1.61
SNX3O60493 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SNX3O60493 AL359922.3-201ENST00000624779 1670 ntBASIC4.96□□□□□ -1.61
SNX3O60493 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNX3O60493 AC104966.1-201ENST00000467010 1464 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC009501.3-201ENST00000605001 1352 ntBASIC4.96□□□□□ -1.62
SNX3O60493 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX3O60493 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SNX3O60493 RNU2-72P-201ENST00000411175 163 ntBASIC4.96□□□□□ -1.62
SNX3O60493 HMGN1P20-201ENST00000411849 300 ntBASIC4.96□□□□□ -1.62
SNX3O60493 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX3O60493 AC093084.1-201ENST00000424233 687 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.96□□□□□ -1.62
SNX3O60493 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX3O60493 AC068228.1-201ENST00000461723 211 ntBASIC4.96□□□□□ -1.62
SNX3O60493 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC093770.1-201ENST00000511559 571 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC114781.3-201ENST00000512083 142 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC034244.2-201ENST00000514668 858 ntBASIC4.96□□□□□ -1.62
SNX3O60493 SNORA43.3-201ENST00000517240 103 ntBASIC4.96□□□□□ -1.62
SNX3O60493 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.96□□□□□ -1.62
SNX3O60493 NRBF2P4-201ENST00000520874 850 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.96□□□□□ -1.62
SNX3O60493 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.96□□□□□ -1.62
SNX3O60493 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SNX3O60493 GSTP1P1-201ENST00000548078 319 ntBASIC4.96□□□□□ -1.62
SNX3O60493 CKS1BP1-201ENST00000555221 240 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SNX3O60493 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX3O60493 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.96□□□□□ -1.62
SNX3O60493 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX3O60493 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX3O60493 AC004241.3-201ENST00000611728 517 ntBASIC4.96□□□□□ -1.62
SNX3O60493 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.96□□□□□ -1.62
SNX3O60493 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SNX3O60493 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.96□□□□□ -1.62
SNX3O60493 AC111152.1-202ENST00000635848 339 ntBASIC4.96□□□□□ -1.62
SNX3O60493 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SNX3O60493 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SNX3O60493 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
SNX3O60493 Z95327.2-201ENST00000414579 1873 ntBASIC4.96□□□□□ -1.62
SNX3O60493 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 AC104118.1-201ENST00000607625 1589 ntBASIC4.95□□□□□ -1.62
SNX3O60493 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SNX3O60493 MIR375-201ENST00000362103 64 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MIR133B-201ENST00000362210 119 ntBASIC4.95□□□□□ -1.62
SNX3O60493 RNU1-94P-201ENST00000362627 173 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MIR105-1-201ENST00000385222 81 ntBASIC4.95□□□□□ -1.62
SNX3O60493 MIR137-201ENST00000385223 102 ntBASIC4.95□□□□□ -1.62
SNX3O60493 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SNX3O60493 LRRC37BP1-201ENST00000398851 714 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC009237.10-201ENST00000414112 510 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX3O60493 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.95□□□□□ -1.62
SNX3O60493 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 AC006065.1-201ENST00000422539 802 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC073464.3-201ENST00000422564 712 ntBASIC4.95□□□□□ -1.62
SNX3O60493 RGS17P1-201ENST00000423358 553 ntBASIC4.95□□□□□ -1.62
SNX3O60493 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.95□□□□□ -1.62
SNX3O60493 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.95□□□□□ -1.62
SNX3O60493 RPS29P10-201ENST00000439197 166 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC073052.1-201ENST00000440417 714 ntBASIC4.95□□□□□ -1.62
SNX3O60493 TDGF1P1-201ENST00000445734 527 ntBASIC4.95□□□□□ -1.62
SNX3O60493 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 871.4 ms