Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.14□□□□□ -1.43
RGPD3A6NKT7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 OR13Z1P-201ENST00000416141 834 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 MRPL35P2-201ENST00000448009 511 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AL049536.1-201ENST00000625043 744 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 OR14L1P-202ENST00000641545 3009 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC009779.8-201ENST00000641684 4384 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AL033543.1-201ENST00000623440 13454 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC090220.1-201ENST00000593078 1699 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 RNA5SP387-201ENST00000364226 106 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 LINC00993-201ENST00000420453 540 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 DSTNP2-201ENST00000504533 515 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 IGLVIV-65-201ENST00000517313 360 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC084824.2-201ENST00000548906 345 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 U3.53-201ENST00000628922 216 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 AC000095.2-202ENST00000637415 154 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RGPD3A6NKT7 TLK1P1-201ENST00000456760 2440 ntBASIC6.13□□□□□ -1.43
RGPD3A6NKT7 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 AL121657.1-201ENST00000327215 531 ntBASIC6.12□□□□□ -1.43
RGPD3A6NKT7 RNU1-82P-201ENST00000390851 165 ntBASIC6.12□□□□□ -1.43
RGPD3A6NKT7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 SNORA67.7-201ENST00000516664 135 ntBASIC6.12□□□□□ -1.43
RGPD3A6NKT7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 AC025857.2-201ENST00000602711 238 ntBASIC6.12□□□□□ -1.43
RGPD3A6NKT7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 AP000547.3-204ENST00000588548 2523 ntBASIC6.12□□□□□ -1.43
RGPD3A6NKT7 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RGPD3A6NKT7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 ZNF137P-201ENST00000456718 1920 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 AL035079.1-201ENST00000405210 287 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 TRAV8-5-201ENST00000537369 341 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 AC116553.2-201ENST00000564203 463 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 MIR7853-201ENST00000584820 132 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 ARF4P1-201ENST00000605447 541 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
RGPD3A6NKT7 MIR6133-201ENST00000617057 108 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 AC008758.3-201ENST00000507003 1829 ntBASIC6.11□□□□□ -1.43
RGPD3A6NKT7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms