Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 RNU1-77P-201ENST00000390868 162 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 RNA5SP178-201ENST00000410380 128 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 MTCO2P21-201ENST00000419780 677 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC002069.1-201ENST00000429649 1159 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 MTCYBP21-201ENST00000443300 1113 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 MTCYBP35-201ENST00000503630 1137 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 SNORA19.3-201ENST00000516165 130 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 MTCYBP23-201ENST00000558717 1102 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC008751.2-201ENST00000597885 980 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC005252.1-201ENST00000604518 1063 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL365400.2-201ENST00000605604 902 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AC083865.1-201ENST00000636634 831 ntBASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TCRBV5S1A1TA0A578 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC012321.1-201ENST00000561622 1588 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 NANOGP5-201ENST00000424456 877 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 FO393414.1-201ENST00000428697 1184 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 MTND5P25-201ENST00000430499 799 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 FABP5P3-201ENST00000437960 408 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 MTCO1P53-201ENST00000441633 699 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 SETP20-201ENST00000457046 852 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC104849.1-201ENST00000462623 405 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 PPP1R11P1-201ENST00000486095 376 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 TPT1P3-201ENST00000492841 512 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC021087.2-201ENST00000504656 1203 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 RNA5SP362-201ENST00000516048 118 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 RNU6-311P-201ENST00000516224 102 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 HMGB1P40-201ENST00000525121 540 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 MTATP6P15-201ENST00000527233 835 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC010735.1-201ENST00000567305 1026 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AL160237.3-201ENST00000604114 1013 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AP004372.1-201ENST00000604842 844 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC019080.5-201ENST00000624891 757 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC002525.1-201ENST00000624392 1622 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 AC023421.1-201ENST00000590535 1785 ntBASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.55□□□□□ -1.52
TCRBV5S1A1TA0A578 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TCRBV5S1A1TA0A578 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TCRBV5S1A1TA0A578 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms