Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RN7SL604P-201ENST00000492589 296 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 RPL36AP41-201ENST00000493820 306 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 NIFKP7-201ENST00000503365 834 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AP002981.1-201ENST00000517692 975 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC100784.1-201ENST00000522790 310 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC009643.1-201ENST00000532030 391 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC005191.1-201ENST00000603950 358 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC092376.2-201ENST00000622621 4116 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 CASC19-260ENST00000641828 2001 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 RPL7P58-201ENST00000402913 758 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 CENPIP1-201ENST00000425713 902 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 MIR3160-1-201ENST00000577972 85 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AP005119.2-201ENST00000579735 1105 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 AC073091.2-201ENST00000603205 907 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 U3.53-201ENST00000628922 216 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SCN11AQ9UI33 NOL8P1-201ENST00000508336 3529 ntBASIC6.18□□□□□ -1.42
SCN11AQ9UI33 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 AC002525.1-201ENST00000624392 1622 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 RNA5SP447-201ENST00000363749 119 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 U3.22-201ENST00000391120 215 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 AC140479.3-201ENST00000418944 1126 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 RPL12P34-201ENST00000424532 479 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 AC104763.1-201ENST00000475274 360 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 RN7SKP122-201ENST00000515923 296 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 AL020997.2-201ENST00000602607 184 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 CCT8P1-201ENST00000413611 1657 ntBASIC6.17□□□□□ -1.42
SCN11AQ9UI33 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.17□□□□□ -1.42
SCN11AQ9UI33 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 RPL21P108-201ENST00000413857 481 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 KCTD10P1-201ENST00000434203 625 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC073143.1-201ENST00000436316 395 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AL136455.1-201ENST00000441083 1240 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 EIF2S2P2-201ENST00000447161 982 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC010326.1-201ENST00000462726 602 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC083829.1-201ENST00000503756 657 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 MIR4675-201ENST00000577898 77 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 MIR4284-201ENST00000578924 81 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 MIR4715-201ENST00000584117 79 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC010857.1-201ENST00000606398 594 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 MLECP1-201ENST00000615893 709 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AL121950.1-201ENST00000624993 2077 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCN11AQ9UI33 AC135352.1-201ENST00000506173 1418 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 MIR1193-201ENST00000408109 78 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 RGS17P1-201ENST00000423358 553 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 RN7SL41P-201ENST00000476144 297 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 OR11I1P-201ENST00000486033 954 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 SLC25A15P5-201ENST00000508033 253 ntBASIC6.16□□□□□ -1.42
SCN11AQ9UI33 IGHVIII-2-1-201ENST00000518843 291 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms