Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 CASC19-206ENST00000641028 1430 ntBASIC4.73□□□□□ -1.65
CCDC88CQ9P219 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC88CQ9P219 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC073648.4-201ENST00000442655 781 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 SNORA70.11-201ENST00000515987 138 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 SNORA70.13-201ENST00000516116 138 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 OR8G5-201ENST00000524943 1041 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC093524.1-201ENST00000564266 1094 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC009852.2-201ENST00000567898 485 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC105254.2-201ENST00000603636 436 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC022417.1-201ENST00000624768 1303 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 CYB5AP4-201ENST00000396692 399 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 MRPS33P2-201ENST00000507850 322 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 ASNSP4-201ENST00000511103 447 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 RNA5SP228-201ENST00000516232 133 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AP001880.2-201ENST00000538233 448 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC105129.1-201ENST00000560250 297 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC209154.1-201ENST00000582156 337 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AC018695.5-201ENST00000605872 315 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC88CQ9P219 AL442128.2-201ENST00000620246 1824 ntBASIC4.72□□□□□ -1.65
CCDC88CQ9P219 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC88CQ9P219 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC88CQ9P219 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC073264.2-201ENST00000448886 166 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 HMGN2P25-201ENST00000486956 268 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC104971.1-201ENST00000495117 578 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 RN7SL690P-201ENST00000582087 240 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC239803.2-201ENST00000610161 430 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 MIR6810-201ENST00000622701 70 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC068870.3-201ENST00000625077 2536 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 AC093591.2-201ENST00000565254 3843 ntBASIC4.71□□□□□ -1.66
CCDC88CQ9P219 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC88CQ9P219 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC88CQ9P219 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms