Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC025470.1-201ENST00000510053 2032 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 CYP1D1P-201ENST00000416662 1433 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 RNA5SP183-201ENST00000362452 119 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 U3.10-201ENST00000364459 214 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 RNU6-883P-201ENST00000384597 107 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 RNU11-201ENST00000387069 134 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 NPM1P10-201ENST00000398310 865 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 RNA5SP487-201ENST00000410186 122 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AL121878.1-201ENST00000418638 859 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AL133325.1-201ENST00000421090 382 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC093655.2-201ENST00000425735 631 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC239809.1-201ENST00000450470 217 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 HMGB3P14-201ENST00000494195 599 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AF186190.1-201ENST00000517470 480 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 HMGB1P46-201ENST00000520062 610 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 IGKV2D-10-201ENST00000520194 281 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 OR4A17P-201ENST00000526032 904 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 OR8Q1P-201ENST00000526467 655 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 NPM1P47-201ENST00000560843 856 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AL360012.1-201ENST00000602813 131 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC016957.2-201ENST00000616998 848 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC079298.2-201ENST00000623885 459 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 PCAT14-202ENST00000627127 3935 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC7.03□□□□□ -1.28
CHMP4AQ9BY43 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CHMP4AQ9BY43 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
CHMP4AQ9BY43 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC021242.1-201ENST00000507315 2035 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 RAD1P1-201ENST00000231383 813 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC073464.3-201ENST00000422564 712 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 CFL1P1-202ENST00000432948 411 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AL606490.1-201ENST00000452266 765 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC010683.1-201ENST00000473673 378 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 SNORD116-26-201ENST00000516006 96 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 HMGB1P40-201ENST00000525121 540 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 HNRNPCP4-201ENST00000571636 900 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 DPRXP4-201ENST00000578053 568 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 FKBP1AP1-201ENST00000594588 318 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC012557.1-201ENST00000607115 611 ntBASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4AQ9BY43 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4AQ9BY43 AC011155.1-201ENST00000316512 456 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms