Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AC079075.1-201ENST00000559543 878 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 MIR4270-201ENST00000581799 70 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 AL161616.1-201ENST00000611867 286 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 MIR7703-201ENST00000620784 77 ntBASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.09□□□□□ -1.43
RPAP1Q9BWH6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.09□□□□□ -1.44
RPAP1Q9BWH6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.09□□□□□ -1.44
RPAP1Q9BWH6 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RPAP1Q9BWH6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.09□□□□□ -1.44
RPAP1Q9BWH6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 SNORA2.3-201ENST00000383920 135 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 GAPDHP15-201ENST00000398586 975 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 NPM1P40-201ENST00000412758 733 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC019050.1-201ENST00000418508 492 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AL672167.3-201ENST00000465951 960 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC096741.1-201ENST00000472250 846 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC069304.1-201ENST00000491593 704 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 FTH1P11-201ENST00000517577 551 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 HNRNPRP2-201ENST00000528421 743 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 GCSHP4-201ENST00000538792 439 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 AL022393.1-201ENST00000625142 1677 ntBASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.08□□□□□ -1.44
RPAP1Q9BWH6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC007559.1-201ENST00000428736 355 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 RBMY2TP-201ENST00000451162 947 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 RPS17P2-201ENST00000461663 408 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC008897.1-201ENST00000494006 347 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 OR7H2P-201ENST00000513483 306 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 NMNAT1P1-201ENST00000554095 876 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC018552.1-201ENST00000562099 811 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 MIR3667-201ENST00000581025 74 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC105254.2-201ENST00000603636 436 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 MIR6780A-201ENST00000615089 68 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AP000346.3-201ENST00000622821 210 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AL672167.1-204ENST00000641875 3017 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 AC104623.2-202ENST00000623477 4002 ntBASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.07□□□□□ -1.44
RPAP1Q9BWH6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 Z97832.1-201ENST00000402490 328 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PCNPP4-201ENST00000414817 517 ntBASIC6.06□□□□□ -1.44
RPAP1Q9BWH6 PRPF38AP2-201ENST00000438179 851 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms