Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SNRPCP2-201ENST00000504370 475 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 RN7SKP46-201ENST00000515942 234 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 OR10D4P-201ENST00000525892 951 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 OR4A46P-201ENST00000527255 933 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC022832.1-201ENST00000530718 645 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 AC099494.2-201ENST00000623371 978 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL21A1Q96P44 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.77□□□□□ -1.65
COL21A1Q96P44 CASC19-221ENST00000641309 1382 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 PANDAR-201ENST00000629595 1506 ntBASIC4.77□□□□□ -1.65
COL21A1Q96P44 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 MIR1178-201ENST00000408396 91 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 SMC4P1-201ENST00000414479 527 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 BX510359.3-201ENST00000422168 306 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 COX6CP13-201ENST00000428703 226 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SERPINA7P1-201ENST00000443077 631 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC073073.1-201ENST00000493920 463 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC006499.3-201ENST00000506077 748 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 OR10G5P-201ENST00000532733 358 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 HAUS8P1-201ENST00000549005 542 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC008126.1-201ENST00000549019 480 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 AL121612.2-201ENST00000612261 482 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SAMMSON-213ENST00000641336 1521 ntBASIC4.76□□□□□ -1.65
COL21A1Q96P44 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL21A1Q96P44 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL21A1Q96P44 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC083843.3-201ENST00000623679 2186 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 U3.36-201ENST00000408418 213 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 RNU4-34P-201ENST00000410431 124 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 MTND4LP21-201ENST00000415303 295 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC005033.1-201ENST00000428904 813 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 RPL7AP61-201ENST00000443410 636 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC004980.3-201ENST00000447046 365 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC026348.1-201ENST00000462549 1053 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC073358.1-201ENST00000505671 684 ntBASIC4.75□□□□□ -1.65
COL21A1Q96P44 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL21A1Q96P44 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.75□□□□□ -1.65
COL21A1Q96P44 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms