Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AL390726.5-202ENST00000564800 256 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 MTCYBP13-201ENST00000578634 1093 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC093799.2-201ENST00000610062 578 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC068870.2-201ENST00000620635 389 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC091932.2-201ENST00000623014 291 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 CASC19-221ENST00000641309 1382 ntBASIC5.26□□□□□ -1.57
RPRD1AQ96P16 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RPRD1AQ96P16 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 SNORA2.3-201ENST00000383920 135 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 SNORA66-201ENST00000384792 133 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AL035079.1-201ENST00000405210 287 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AL589765.3-201ENST00000446084 462 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 OR52E3P-201ENST00000452083 936 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AP000942.1-201ENST00000463969 747 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 RPL5P16-201ENST00000471467 790 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC016559.2-201ENST00000510759 359 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC027369.5-201ENST00000533838 755 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 PRPF19P1-201ENST00000584766 898 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 EIF3FP1-201ENST00000613970 806 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.25□□□□□ -1.57
RPRD1AQ96P16 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RPRD1AQ96P16 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 CHMP1B2P-201ENST00000399581 597 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 PCNPP4-201ENST00000414817 517 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 GJA6P-201ENST00000415117 1042 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC046176.1-201ENST00000435260 1170 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RPL34P20-201ENST00000442771 351 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RN7SL329P-201ENST00000467740 299 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC098583.1-201ENST00000480875 255 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC016687.1-201ENST00000482574 353 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 NPM1P29-201ENST00000483112 803 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RN7SL244P-201ENST00000493405 297 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC010350.1-201ENST00000504908 231 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 COX6B1P5-201ENST00000509843 249 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 OR7E128P-201ENST00000532736 1024 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC084759.1-201ENST00000561168 290 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC233702.9-201ENST00000581528 203 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC105254.2-201ENST00000603636 436 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC090510.2-201ENST00000617465 629 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 CASC19-222ENST00000641321 1173 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC021242.1-201ENST00000507315 2035 ntBASIC5.24□□□□□ -1.57
RPRD1AQ96P16 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RPRD1AQ96P16 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
RPRD1AQ96P16 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms