Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
VPS33AQ96AX1 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RNA5SP394-201ENST00000364216 119 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RNU6-304P-201ENST00000364855 107 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 MIR551A-201ENST00000385042 96 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 DBIP1-201ENST00000401435 260 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AL353692.2-201ENST00000407054 335 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RNU2-50P-201ENST00000410494 143 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC069154.1-201ENST00000432914 542 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 SUMO2P1-206ENST00000445436 284 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RPL34P26-201ENST00000445636 354 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 YRDCP3-201ENST00000456507 480 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RPL15P21-201ENST00000495592 567 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RNU6-615P-201ENST00000516065 106 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC011853.1-201ENST00000518911 454 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC004923.2-201ENST00000529649 369 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 MRPS21P7-201ENST00000566937 238 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC005520.3-201ENST00000602874 370 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 KATNBL1P5-201ENST00000605015 517 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AP004607.9-201ENST00000618202 316 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AP005431.1-201ENST00000618479 319 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 FO681491.1-202ENST00000623392 737 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC073592.6-201ENST00000624271 415 ntBASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.15□□□□□ -1.59
VPS33AQ96AX1 IFIT1P1-201ENST00000400497 1449 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 OR9G4-201ENST00000302957 984 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC017079.1-201ENST00000333650 415 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 RNU1-19P-201ENST00000363306 165 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 RN7SKP6-201ENST00000364795 319 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 SNORA16A-201ENST00000384342 137 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 NCSTNP1-201ENST00000406229 144 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC105402.1-201ENST00000413336 545 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 TRGV6-201ENST00000417928 299 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC090018.1-201ENST00000434369 367 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AL035090.1-201ENST00000454835 332 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 MTND2P6-201ENST00000455337 1030 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC021660.1-201ENST00000465006 554 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 RPS24P16-201ENST00000497294 392 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AC122718.2-201ENST00000505325 591 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.14□□□□□ -1.59
VPS33AQ96AX1 HAUS1P3-201ENST00000523909 662 ntBASIC5.14□□□□□ -1.59
VPS33AQ96AX1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms