Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC011445.2-201ENST00000599274 173 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AL445435.1-201ENST00000604232 665 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AL078595.3-201ENST00000623815 1166 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 AC140134.1-201ENST00000511830 3544 ntBASIC6.18□□□□□ -1.42
HPS3Q969F9 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.18□□□□□ -1.42
HPS3Q969F9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.18□□□□□ -1.42
HPS3Q969F9 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HPS3Q969F9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 NXF4-202ENST00000416098 1465 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC093849.1-201ENST00000563631 2209 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AL353796.1-201ENST00000561542 3241 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 NLRP3P1-201ENST00000622303 1785 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC104297.1-201ENST00000393779 870 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 RPS3AP2-201ENST00000407190 754 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC016769.2-201ENST00000414815 475 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC023128.2-201ENST00000420880 1223 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC138761.5-201ENST00000433967 325 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 ARAFP2-201ENST00000440565 559 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 MTCO1P53-201ENST00000441633 699 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 VDAC2P4-201ENST00000452925 711 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC007998.1-201ENST00000474156 672 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC106872.4-201ENST00000510050 523 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC091163.3-201ENST00000518269 1144 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 OR8G5-201ENST00000524943 1041 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 OR8Q1P-201ENST00000526467 655 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC009237.13-201ENST00000603193 276 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC068313.1-201ENST00000604028 1008 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC073387.2-201ENST00000604797 784 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS3Q969F9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS3Q969F9 AC016745.2-201ENST00000608834 3443 ntBASIC6.17□□□□□ -1.42
HPS3Q969F9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.17□□□□□ -1.42
HPS3Q969F9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.17□□□□□ -1.42
HPS3Q969F9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HPS3Q969F9 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC093671.1-201ENST00000624981 2929 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
HPS3Q969F9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.16□□□□□ -1.42
HPS3Q969F9 RNU6-666P-201ENST00000363499 107 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 SNORA16A-201ENST00000384342 137 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AL009179.1-201ENST00000406085 265 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AL034374.1-201ENST00000406329 351 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 RNU2-22P-201ENST00000411266 212 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 RNA5SP498-201ENST00000411342 120 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 MTND6P12-201ENST00000428247 522 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 FMO7P-201ENST00000436045 768 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.16□□□□□ -1.42
HPS3Q969F9 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AL009048.1-201ENST00000450437 298 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AZGP1P2-201ENST00000454506 345 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 AC026414.1-201ENST00000504046 698 ntBASIC6.16□□□□□ -1.42
HPS3Q969F9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HPS3Q969F9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms