Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AC007688.1-201ENST00000475592 759 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AC022884.2-201ENST00000578535 580 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 AC093765.1-201ENST00000603758 881 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 AL139041.1-201ENST00000605480 610 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 AL392048.1-201ENST00000613946 534 ntBASIC5.97□□□□□ -1.45
SNED1Q8TER0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNED1Q8TER0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.97□□□□□ -1.45
SNED1Q8TER0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
SNED1Q8TER0 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.96□□□□□ -1.45
SNED1Q8TER0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.96□□□□□ -1.45
SNED1Q8TER0 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNED1Q8TER0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNED1Q8TER0 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNED1Q8TER0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNED1Q8TER0 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 RNU11-201ENST00000387069 134 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 GAPDHP14-201ENST00000450472 937 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 AC104971.1-201ENST00000495117 578 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 PRPF19P1-201ENST00000584766 898 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 AC022726.1-201ENST00000587475 207 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 AL360012.1-201ENST00000602813 131 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 MIR6716-201ENST00000613413 80 ntBASIC5.96□□□□□ -1.46
SNED1Q8TER0 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNED1Q8TER0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNED1Q8TER0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNED1Q8TER0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC009951.1-201ENST00000623674 2614 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 OR1L6-202ENST00000373684 1044 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 YY1P1-201ENST00000427625 668 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 BTG3P1-201ENST00000435859 716 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC007537.2-201ENST00000472093 511 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 MIR5699-201ENST00000578903 90 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 FAM27B-201ENST00000610601 213 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC245389.2-201ENST00000616023 576 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AL121890.3-201ENST00000618494 516 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC242843.1-201ENST00000618702 573 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC026367.3-201ENST00000619032 590 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNED1Q8TER0 AC099654.3-201ENST00000447087 1546 ntBASIC5.95□□□□□ -1.46
SNED1Q8TER0 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SNED1Q8TER0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNED1Q8TER0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms