Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
NEDD1Q8NHV4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL929601.4-201ENST00000613011 1341 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL391262.1-201ENST00000556558 1992 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC106872.5-201ENST00000508856 1416 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 NAP1L4P1-201ENST00000319092 1157 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNU6-252P-201ENST00000363232 107 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNU1-65P-201ENST00000363919 148 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 SNORA40.2-201ENST00000390847 128 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL139805.1-201ENST00000407837 289 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL035422.1-201ENST00000414193 397 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 BTF3P8-201ENST00000414577 526 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 ARL5AP2-201ENST00000444698 533 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC007327.1-201ENST00000447461 264 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC093166.3-201ENST00000448785 303 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC013267.1-201ENST00000458227 267 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 CTSLP6-201ENST00000458273 1002 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 NCOR1P1-202ENST00000486162 291 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RPL37P23-201ENST00000492641 294 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC011352.3-201ENST00000505162 593 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 ZNF519P4-201ENST00000514008 125 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP206-201ENST00000516703 121 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNA5SP441-201ENST00000516809 88 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RNU6-264P-201ENST00000517134 104 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL355836.1-201ENST00000555951 870 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RPS3AP23-202ENST00000574601 686 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 MIR4528-201ENST00000577763 90 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 SMIM12P1-201ENST00000603004 274 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC068276.1-201ENST00000605793 379 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AL607023.1-201ENST00000620045 248 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC092111.1-201ENST00000618256 3358 ntBASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.53□□□□□ -1.2
NEDD1Q8NHV4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.52□□□□□ -1.2
NEDD1Q8NHV4 MTCO1P23-201ENST00000415223 1526 ntBASIC7.52□□□□□ -1.2
NEDD1Q8NHV4 AC087565.3-202ENST00000642085 1603 ntBASIC7.52□□□□□ -1.2
NEDD1Q8NHV4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 Z93929.1-201ENST00000418200 1475 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 AC092725.2-201ENST00000567658 1389 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 NACA3P-201ENST00000359690 648 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 Y_RNA.144-201ENST00000363521 113 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 RNU6-738P-201ENST00000384531 106 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 TATDN1P1-201ENST00000414123 891 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 LINC00993-201ENST00000420453 540 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 AC069154.1-201ENST00000432914 542 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 AC094019.1-201ENST00000434678 472 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 AC108463.1-201ENST00000450258 347 ntBASIC7.52□□□□□ -1.21
NEDD1Q8NHV4 RNA5SP269-201ENST00000459032 137 ntBASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms