Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL021939.1-201ENST00000441868 886 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC004980.3-201ENST00000447046 365 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL136380.1-201ENST00000447970 162 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 FTH1P23-201ENST00000492727 550 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL416P-201ENST00000494042 298 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL388P-201ENST00000498736 339 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 NIFKP7-201ENST00000503365 834 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC073648.3-201ENST00000504939 925 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC034159.1-201ENST00000513885 583 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-202P-201ENST00000515998 96 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AP002373.2-201ENST00000541631 1060 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC013283.1-201ENST00000557282 492 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC006547.1-208ENST00000598339 805 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL136363.1-201ENST00000605349 337 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.812-201ENST00000610788 101 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.784-201ENST00000613803 101 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.787-201ENST00000616522 101 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.780-201ENST00000617336 101 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.801-201ENST00000619005 101 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC241377.1-201ENST00000619797 406 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 MAPK10-323ENST00000641493 3207 ntBASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DEPDC4Q8N2C3 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RPL23AP57-201ENST00000332361 466 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RNU4-79P-201ENST00000362764 141 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.157-201ENST00000363638 102 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 Y_RNA.159-201ENST00000363674 87 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RNU6-444P-201ENST00000383988 108 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC008280.1-201ENST00000418851 412 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 DUTP4-201ENST00000424782 475 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RPL7P54-201ENST00000438336 674 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 ACTR3P2-201ENST00000439585 1257 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC083798.1-201ENST00000472671 131 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 RN7SL751P-201ENST00000473281 284 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 SCARNA20.1-201ENST00000516009 138 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 SNORA81.2-201ENST00000516868 170 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 OR5M2P-201ENST00000529003 936 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AP000911.4-201ENST00000532272 516 ntTSL 4 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 DPPA3P2-201ENST00000553589 478 ntBASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7□□□□□ -1.29
DEPDC4Q8N2C3 AC109460.4-201ENST00000561471 454 ntTSL 3 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms