Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC50Q8IVM0 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 MIR323A-201ENST00000362199 86 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 RNU1-94P-201ENST00000362627 173 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 RN7SKP15-201ENST00000364742 309 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 MIR1182-201ENST00000408363 97 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC108075.1-201ENST00000424692 529 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 RPL7AP61-201ENST00000443410 636 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC134349.2-201ENST00000535136 910 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 MTND2P17-201ENST00000550281 688 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AGGF1P9-201ENST00000561884 913 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 AC011493.1-201ENST00000596753 1632 ntBASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC50Q8IVM0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL929601.4-201ENST00000613011 1341 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC011503.2-201ENST00000594230 1500 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 MTHFD2P5-201ENST00000320415 844 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 IL6STP1-201ENST00000346911 1020 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL353625.1-202ENST00000366273 571 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 OR2A3P-201ENST00000493774 953 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 RN7SL176P-201ENST00000580352 264 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AP005432.2-201ENST00000608162 586 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL354950.1-201ENST00000614150 568 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 MIR6837-201ENST00000620884 64 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 AL049767.1-202ENST00000637826 242 ntBASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CCDC50Q8IVM0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 AC107068.1-201ENST00000563286 4218 ntBASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 AC097461.1-201ENST00000568928 2821 ntBASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 GTF2IP2-201ENST00000424290 697 ntBASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 RPS26P4-201ENST00000431743 355 ntBASIC5.28□□□□□ -1.56
CCDC50Q8IVM0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms