Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MIR3691-201ENST00000578066 90 ntBASIC4.82□□□□□ -1.64
RTL4Q6ZR62 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 MIR7155-201ENST00000615925 56 ntBASIC4.82□□□□□ -1.64
RTL4Q6ZR62 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 AC011447.7-201ENST00000624228 1590 ntBASIC4.82□□□□□ -1.64
RTL4Q6ZR62 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RTL4Q6ZR62 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC023421.1-201ENST00000590535 1785 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 U3.3-201ENST00000362986 216 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 NUDT19P3-201ENST00000404698 555 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CLUHP1-201ENST00000435012 1190 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AP006245.2-201ENST00000522004 300 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 OR4A46P-201ENST00000527255 933 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC092490.3-201ENST00000545370 572 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 OR11J2P-201ENST00000555298 907 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC006116.3-201ENST00000592968 361 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AP002884.5-201ENST00000595053 1132 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AL162431.4-201ENST00000604674 411 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CASC19-222ENST00000641321 1173 ntBASIC4.81□□□□□ -1.64
RTL4Q6ZR62 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.81□□□□□ -1.64
RTL4Q6ZR62 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AC104118.1-201ENST00000607625 1589 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RNA5SP305-201ENST00000362665 119 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 UBBP2-201ENST00000376781 231 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AL672167.2-201ENST00000377164 879 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AL645927.1-201ENST00000396783 406 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RPS4XP16-201ENST00000427198 791 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 GAPDHP58-201ENST00000438477 1006 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 CYCSP24-201ENST00000445119 316 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RN7SL610P-201ENST00000463845 291 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 NIP7P2-201ENST00000485801 544 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RPL7P41-201ENST00000485823 957 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.8□□□□□ -1.64
RTL4Q6ZR62 AC006427.1-201ENST00000514359 712 ntBASIC4.8□□□□□ -1.64
RTL4Q6ZR62 RN7SKP66-201ENST00000516681 231 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms