Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC233266.2-201ENST00000567067 528 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC135178.6-201ENST00000605314 398 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC017076.1-201ENST00000607613 578 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC022106.1-201ENST00000612834 766 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC008691.1-209ENST00000642094 814 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 AC074029.4-201ENST00000624796 1859 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 NEPNP-201ENST00000404786 1371 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 MTND4P21-201ENST00000453886 1357 ntBASIC4.91□□□□□ -1.62
C11orf88Q6PI97 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
C11orf88Q6PI97 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
C11orf88Q6PI97 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RNU1-134P-201ENST00000362935 165 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RNU1-136P-201ENST00000384181 164 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 U3.28-201ENST00000391249 210 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 HMGB1P10-201ENST00000395823 563 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RNU2-17P-201ENST00000410290 190 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SLC20A1P1-201ENST00000413906 956 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL358176.3-201ENST00000420757 454 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC006455.6-201ENST00000426192 893 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AP000281.1-201ENST00000444036 316 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC097499.1-201ENST00000444277 208 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RPL23AP23-201ENST00000452590 471 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SDC4P-201ENST00000453285 601 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RN7SKP35-201ENST00000517210 151 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC087272.1-201ENST00000523624 533 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC090819.1-201ENST00000523800 1111 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC079905.1-201ENST00000549280 475 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC079600.1-201ENST00000550326 297 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RN7SL753P-201ENST00000581238 290 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL645927.2-201ENST00000618350 349 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL023881.1-201ENST00000621088 301 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 FO681491.1-202ENST00000623392 737 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC024023.1-201ENST00000624530 922 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 FRG1EP-201ENST00000634469 770 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AL353743.4-201ENST00000422653 1547 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.9□□□□□ -1.63
C11orf88Q6PI97 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.9□□□□□ -1.63
C11orf88Q6PI97 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 ZNF90P1-201ENST00000480493 1951 ntBASIC4.89□□□□□ -1.63
C11orf88Q6PI97 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
C11orf88Q6PI97 RNA5SP110-201ENST00000362638 115 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms