Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 RPL7P56-201ENST00000429441 717 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 NANOGP9-201ENST00000439890 892 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 PPIAP27-201ENST00000453800 265 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 AC007688.1-201ENST00000475592 759 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 DUTP1-201ENST00000493631 470 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 AC025768.1-201ENST00000510057 267 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 RN7SKP253-201ENST00000516424 309 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 RN7SKP183-201ENST00000517169 324 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC011853.1-201ENST00000518911 454 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 PMS2P3-207ENST00000529061 717 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 OR5AM1P-201ENST00000532136 1032 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC079905.1-201ENST00000549280 475 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 AC007956.1-201ENST00000555623 542 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN1BQ07699 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.86□□□□□ -1.63
SCN1BQ07699 ZNF92P3-201ENST00000596594 954 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AL671309.1-201ENST00000603750 544 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AL136131.3-201ENST00000607600 188 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AP001437.1-201ENST00000608783 456 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC108673.3-201ENST00000609183 335 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 MIR6809-201ENST00000612189 116 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.86□□□□□ -1.63
SCN1BQ07699 AP006248.3-201ENST00000623580 594 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC073592.7-201ENST00000623659 507 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.86□□□□□ -1.63
SCN1BQ07699 NEPNP-201ENST00000404786 1371 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 AC068870.1-201ENST00000563737 2455 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCN1BQ07699 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
SCN1BQ07699 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 PWAR1-201ENST00000624188 2414 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 OR55B1P-203ENST00000641518 2602 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 TMSB4XP2-201ENST00000335179 210 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 RNU1-65P-201ENST00000363919 148 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 BMS1P3-201ENST00000372011 932 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 RNU6-317P-201ENST00000384031 107 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 SNORD56.6-201ENST00000384569 71 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL096711.1-201ENST00000404780 554 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MIR1271-201ENST00000408537 86 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 USP9YP19-201ENST00000412165 485 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC007738.1-201ENST00000413892 348 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MRPL53P1-201ENST00000414323 319 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AL158073.1-201ENST00000426848 1104 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MTATP6P11-201ENST00000428071 670 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL389925.1-201ENST00000432257 728 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 PPIAP13-201ENST00000434706 478 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 RPS20P1-201ENST00000434853 354 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 CLNS1AP1-201ENST00000435954 682 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 RPL12P46-201ENST00000436610 195 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 MED6P1-201ENST00000439659 713 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC097499.1-201ENST00000444277 208 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC069540.1-201ENST00000446320 988 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 RPL31P44-201ENST00000447680 377 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 GEMIN2P1-201ENST00000454246 752 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 YRDCP3-201ENST00000456507 480 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 CST12P-201ENST00000457644 362 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC093166.4-201ENST00000457867 318 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC090638.1-201ENST00000498296 909 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC021106.1-201ENST00000509020 1058 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 IGLV3-30-201ENST00000524362 298 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC025918.2-201ENST00000558683 763 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 MIR4260-201ENST00000583107 67 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC110743.1-201ENST00000584870 478 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.85□□□□□ -1.63
SCN1BQ07699 AC090948.2-201ENST00000607363 564 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AL365181.4-201ENST00000609800 547 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms