Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC091515.1-201ENST00000548110 679 ntBASIC5.07□□□□□ -1.6
LTBQ06643 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.07□□□□□ -1.6
LTBQ06643 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.07□□□□□ -1.6
LTBQ06643 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LTBQ06643 MIR4509-3-201ENST00000578671 94 ntBASIC5.07□□□□□ -1.6
LTBQ06643 MIR4509-2-201ENST00000583920 94 ntBASIC5.07□□□□□ -1.6
LTBQ06643 MIMT1-201ENST00000597105 1050 ntBASIC5.07□□□□□ -1.6
LTBQ06643 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.07□□□□□ -1.6
LTBQ06643 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.07□□□□□ -1.6
LTBQ06643 AC009237.13-201ENST00000603193 276 ntBASIC5.07□□□□□ -1.6
LTBQ06643 IMMP1LP3-201ENST00000604197 224 ntBASIC5.07□□□□□ -1.6
LTBQ06643 AL022394.1-201ENST00000606979 292 ntBASIC5.07□□□□□ -1.6
LTBQ06643 AC106052.1-201ENST00000608029 497 ntBASIC5.07□□□□□ -1.6
LTBQ06643 AC004241.3-201ENST00000611728 517 ntBASIC5.07□□□□□ -1.6
LTBQ06643 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.07□□□□□ -1.6
LTBQ06643 MIR4509-1-201ENST00000618224 94 ntBASIC5.07□□□□□ -1.6
LTBQ06643 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.07□□□□□ -1.6
LTBQ06643 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.07□□□□□ -1.6
LTBQ06643 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.07□□□□□ -1.6
LTBQ06643 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LTBQ06643 AL034546.1-201ENST00000623740 3693 ntBASIC5.07□□□□□ -1.6
LTBQ06643 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
LTBQ06643 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LTBQ06643 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.07□□□□□ -1.6
LTBQ06643 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LTBQ06643 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LTBQ06643 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.07□□□□□ -1.6
LTBQ06643 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LTBQ06643 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.06□□□□□ -1.6
LTBQ06643 AC083899.1-201ENST00000454465 3819 ntBASIC5.06□□□□□ -1.6
LTBQ06643 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 ZNF29P-201ENST00000225587 168 ntBASIC5.06□□□□□ -1.6
LTBQ06643 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 SNORA70.6-201ENST00000383934 134 ntBASIC5.06□□□□□ -1.6
LTBQ06643 MIR550A3-201ENST00000390735 95 ntBASIC5.06□□□□□ -1.6
LTBQ06643 HMGB1P20-201ENST00000402555 677 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AL139128.1-201ENST00000413921 941 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 HYALP1-201ENST00000417674 1279 ntBASIC5.06□□□□□ -1.6
LTBQ06643 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 RNF19BPX-201ENST00000426224 625 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.06□□□□□ -1.6
LTBQ06643 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 AC093166.2-201ENST00000455969 1017 ntBASIC5.06□□□□□ -1.6
LTBQ06643 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 AP002345.1-201ENST00000456493 928 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.06□□□□□ -1.6
LTBQ06643 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 RNU5A-7P-201ENST00000515979 116 ntBASIC5.06□□□□□ -1.6
LTBQ06643 RNU6-943P-201ENST00000516960 98 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.06□□□□□ -1.6
LTBQ06643 AC074050.1-201ENST00000563247 211 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC233266.2-201ENST00000567067 528 ntBASIC5.06□□□□□ -1.6
LTBQ06643 MIR4311-201ENST00000580794 100 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.06□□□□□ -1.6
LTBQ06643 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 MIR6133-201ENST00000617057 108 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC090510.2-201ENST00000617465 629 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AL355493.4-201ENST00000618530 292 ntBASIC5.06□□□□□ -1.6
LTBQ06643 AC008115.4-201ENST00000619780 775 ntBASIC5.06□□□□□ -1.6
LTBQ06643 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
LTBQ06643 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.06□□□□□ -1.6
LTBQ06643 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.06□□□□□ -1.6
LTBQ06643 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 AP001029.2-203ENST00000589795 4910 ntBASIC5.05□□□□□ -1.6
LTBQ06643 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 HSPD1P14-201ENST00000432666 1618 ntBASIC5.05□□□□□ -1.6
LTBQ06643 SRRM1P3-201ENST00000426911 2678 ntBASIC5.05□□□□□ -1.6
LTBQ06643 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 AC116158.1-201ENST00000560231 2129 ntBASIC5.05□□□□□ -1.6
LTBQ06643 AL929601.4-201ENST00000613011 1341 ntBASIC5.05□□□□□ -1.6
LTBQ06643 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LTBQ06643 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 RNA5SP131-201ENST00000365452 119 ntBASIC5.05□□□□□ -1.6
LTBQ06643 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
LTBQ06643 AL009179.1-201ENST00000406085 265 ntBASIC5.05□□□□□ -1.6
LTBQ06643 RPL23AP27-201ENST00000415161 451 ntBASIC5.05□□□□□ -1.6
LTBQ06643 TNPO1P1-201ENST00000423641 1138 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms