Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC026348.1-201ENST00000462549 1053 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC090686.1-201ENST00000481577 749 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC090142.2-201ENST00000483263 416 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 OR11I1P-201ENST00000486033 954 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 RN7SL214P-201ENST00000487317 265 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 ENPP7P9-201ENST00000514456 627 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC022832.1-201ENST00000530718 645 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 HAUS8P1-201ENST00000549005 542 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 CYCSP40-201ENST00000575927 294 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 MIR4472-2-201ENST00000582069 67 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 OR7E18P-201ENST00000592589 702 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC104687.2-201ENST00000604442 342 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS1Q01581 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS1Q01581 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS1Q01581 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.77□□□□□ -1.65
HMGCS1Q01581 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HMGCS1Q01581 SAMMSON-213ENST00000641336 1521 ntBASIC4.77□□□□□ -1.65
HMGCS1Q01581 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AL672167.1-205ENST00000641112 3080 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 STX3-208ENST00000641815 3236 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC005522.1-201ENST00000395416 346 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC007068.1-201ENST00000396690 844 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 RNU4-34P-201ENST00000410431 124 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 RN7SKP273-201ENST00000411392 314 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 EEF1B2P5-201ENST00000444820 548 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC005532.2-201ENST00000467154 373 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC097484.1-201ENST00000471148 389 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 RPS18P6-201ENST00000476880 458 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 HMGN2P25-201ENST00000486956 268 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 RN7SKP260-201ENST00000516907 149 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 OR10G5P-201ENST00000532733 358 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 SDR42E1P1-201ENST00000611327 477 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC092111.2-201ENST00000611627 1414 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AL049794.2-201ENST00000616301 365 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 AC087821.1-201ENST00000623639 567 ntBASIC4.76□□□□□ -1.65
HMGCS1Q01581 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMGCS1Q01581 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
HMGCS1Q01581 NXF4-202ENST00000416098 1465 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 AL603750.1-201ENST00000624216 1717 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 ECM1P2-201ENST00000503354 1577 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 HSPA8P14-201ENST00000552265 1805 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 SNURFL-201ENST00000309296 343 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 RPL23P2-201ENST00000320371 421 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMGCS1Q01581 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HMGCS1Q01581 U3.36-201ENST00000408418 213 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 RNA5SP296-201ENST00000410523 111 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 NPM1P40-201ENST00000412758 733 ntBASIC4.75□□□□□ -1.65
HMGCS1Q01581 DDX39BP1-205ENST00000422507 192 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms