Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ERVFC1-1P60608 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.51□□□□□ -1.69
ERVFC1-1P60608 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC092111.2-201ENST00000611627 1414 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC017079.1-201ENST00000333650 415 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RNA5SP308-201ENST00000362532 115 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RNU5B-1-201ENST00000363286 116 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RNU1-49P-201ENST00000363468 159 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RNU6-1251P-201ENST00000364502 107 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RN7SKP187-201ENST00000365536 330 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC007068.1-201ENST00000396690 844 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL391422.1-201ENST00000402155 436 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 ATF1P1-201ENST00000406040 927 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL356968.2-201ENST00000412769 1257 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC008173.1-201ENST00000418901 264 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC234781.4-201ENST00000419384 244 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC090960.1-201ENST00000421072 306 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL034379.1-201ENST00000423216 253 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC046176.1-201ENST00000435260 1170 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL359265.1-201ENST00000440296 795 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC234771.2-201ENST00000445718 597 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RN7SL168P-201ENST00000463821 279 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RPS3AP49-201ENST00000472161 790 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 PFN1P6-201ENST00000476786 399 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RN7SL369P-201ENST00000477138 299 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC026414.1-201ENST00000504046 698 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 Y_RNA.710-201ENST00000516975 110 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RN7SKP183-201ENST00000517169 324 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 OR4A2P-201ENST00000527276 913 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 MTCO2P15-201ENST00000532655 656 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 RPL3P13-201ENST00000550415 216 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 OTX2-203ENST00000554559 715 ntTSL 5 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC026956.1-201ENST00000558741 396 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL109653.1-201ENST00000603091 248 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 Z99497.2-201ENST00000603634 310 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC008555.7-201ENST00000605008 583 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC114477.1-201ENST00000605097 605 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL133370.2-201ENST00000619934 439 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC090897.3-201ENST00000636973 1157 ntBASIC4.5□□□□□ -1.69
ERVFC1-1P60608 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.5□□□□□ -1.69
ERVFC1-1P60608 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 ADAM5-202ENST00000399789 1942 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 OR56A4-201ENST00000330728 1209 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 OR10R3P-201ENST00000361688 942 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 SNORD56.4-201ENST00000363883 71 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 RNU4-68P-201ENST00000364314 141 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 RN7SKP292-201ENST00000365522 317 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ERVFC1-1P60608 GSTA12P-201ENST00000402398 508 ntBASIC4.49□□□□□ -1.69
ERVFC1-1P60608 VN1R12P-201ENST00000403778 876 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms