Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 GTF2IP23-201ENST00000423746 351 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 IFNNP1-201ENST00000429219 553 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 MTCO1P3-201ENST00000429327 192 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AL353706.1-201ENST00000436728 494 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 MTND4P6-201ENST00000438297 472 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL591503.2-201ENST00000442314 1005 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 GTF3AP5-201ENST00000442645 697 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 AC097359.1-201ENST00000447946 463 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 RHEBP2-201ENST00000450289 600 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC079776.3-201ENST00000450665 370 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 VN1R32P-201ENST00000452234 905 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 AL445687.2-201ENST00000458156 728 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 GAPDHP36-201ENST00000480688 918 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC114728.1-201ENST00000488289 483 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 CCDC11P1-201ENST00000503137 1162 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC113367.2-201ENST00000505749 160 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 HMGN1P16-201ENST00000508308 283 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.46□□□□□ -1.54
CLRN1P58418 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.46□□□□□ -1.54
CLRN1P58418 NIFKP8-201ENST00000560500 874 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 AC116553.2-201ENST00000564203 463 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC079171.1-201ENST00000568788 914 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 RN7SL230P-201ENST00000580835 303 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 RNU4ATAC-201ENST00000580972 127 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 SS18L2P2-201ENST00000583960 235 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 MIR132-201ENST00000591554 101 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 BNIP3P26-201ENST00000600827 554 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.46□□□□□ -1.54
CLRN1P58418 AC125494.2-201ENST00000602431 657 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 WBP1LP12-201ENST00000604449 331 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.46□□□□□ -1.54
CLRN1P58418 RN7SKP299-201ENST00000606679 301 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC141002.1-201ENST00000607025 279 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC004492.1-201ENST00000607036 742 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AP005137.2-201ENST00000609238 400 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC004223.4-201ENST00000612426 332 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AC015819.1-201ENST00000613588 663 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 MIR6813-201ENST00000621638 56 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 AL162377.2-201ENST00000624532 337 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL121839.2-201ENST00000565058 6943 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 CR381670.1-201ENST00000624291 1693 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CLRN1P58418 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.46□□□□□ -1.54
CLRN1P58418 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 EIF3EP1-201ENST00000433978 1316 ntBASIC5.46□□□□□ -1.54
CLRN1P58418 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CLRN1P58418 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 AC005725.1-201ENST00000577346 2607 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 AL121768.1-201ENST00000613917 2544 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CLRN1P58418 IL6STP1-201ENST00000346911 1020 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.45□□□□□ -1.54
CLRN1P58418 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.45□□□□□ -1.54
CLRN1P58418 AL034374.1-201ENST00000406329 351 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CLRN1P58418 RNU6-575P-201ENST00000411326 105 ntBASIC5.45□□□□□ -1.54
CLRN1P58418 RNA5SP498-201ENST00000411342 120 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms