Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL160175.1-201ENST00000428124 247 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 BX119904.1-201ENST00000432026 348 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN20P56880 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 OR52E3P-201ENST00000452083 936 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC100832.1-201ENST00000471945 383 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RN7SL583P-201ENST00000475692 287 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 SYT14P1-201ENST00000481459 721 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 AC116562.1-201ENST00000485355 781 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RN7SL547P-201ENST00000490793 290 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RPS17P5-201ENST00000498293 408 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC093801.2-201ENST00000503966 1050 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC138701.1-201ENST00000524329 714 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN20P56880 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC127024.5-201ENST00000580085 462 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.99□□□□□ -1.61
CLDN20P56880 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC079880.2-201ENST00000603790 1213 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC073137.1-201ENST00000605636 634 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC010245.2-201ENST00000606908 1167 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC079395.2-201ENST00000610982 737 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC007204.2-201ENST00000615022 616 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC023510.2-201ENST00000622162 746 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 RPL23AP61-201ENST00000623642 466 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLDN20P56880 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 CASC19-248ENST00000641674 1356 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 AC005005.4-201ENST00000623789 16698 ntBASIC4.99□□□□□ -1.61
CLDN20P56880 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CLDN20P56880 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CLDN20P56880 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLDN20P56880 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN20P56880 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 AC007382.1-201ENST00000624376 2618 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 CASC19-261ENST00000641853 1638 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC092681.1-201ENST00000297369 291 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 RN7SKP160-201ENST00000363804 340 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 RN7SKP6-201ENST00000364795 319 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 AC211486.3-201ENST00000412694 621 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC007161.1-204ENST00000423039 460 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.98□□□□□ -1.61
CLDN20P56880 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC018635.1-201ENST00000468292 1030 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 ATP5LP5-201ENST00000483050 299 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC090638.1-201ENST00000498296 909 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLDN20P56880 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC112518.2-201ENST00000508565 425 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC121161.1-201ENST00000510606 652 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 ASNSP4-201ENST00000511103 447 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.98□□□□□ -1.61
CLDN20P56880 ATP5LP3-201ENST00000514223 304 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 MTCO3P27-201ENST00000514397 196 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 RN7SKP99-201ENST00000517028 307 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 MTCYBP19-201ENST00000517463 1124 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.98□□□□□ -1.61
CLDN20P56880 AC127381.1-201ENST00000555979 939 ntBASIC4.98□□□□□ -1.61
CLDN20P56880 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.98□□□□□ -1.61
CLDN20P56880 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms