Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.64□□□□□ -1.51
HDAC4P56524 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HDAC4P56524 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HDAC4P56524 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HDAC4P56524 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HDAC4P56524 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HDAC4P56524 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 AC110792.3-201ENST00000595906 1614 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 SNORD115-48-201ENST00000364764 76 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 OR13Z1P-201ENST00000416141 834 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 MTND4P24-201ENST00000424002 397 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.63□□□□□ -1.51
HDAC4P56524 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 GSTM5P1-201ENST00000434751 660 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 MTND2P21-201ENST00000436242 1042 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 AL589765.3-201ENST00000446084 462 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 RN7SL51P-201ENST00000468230 285 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AC100832.1-201ENST00000471945 383 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HDAC4P56524 AC092754.1-201ENST00000472975 479 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 EIF3LP3-201ENST00000495197 822 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.63□□□□□ -1.51
HDAC4P56524 IGBP1P4-201ENST00000503202 879 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.63□□□□□ -1.51
HDAC4P56524 AL358913.1-201ENST00000554342 121 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 AC105148.1-201ENST00000604961 409 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 MIR8080-201ENST00000622224 89 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 AL590396.2-201ENST00000636511 1041 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.63□□□□□ -1.51
HDAC4P56524 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 RLIMP2-201ENST00000427891 1563 ntBASIC5.63□□□□□ -1.51
HDAC4P56524 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HDAC4P56524 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.63□□□□□ -1.51
HDAC4P56524 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 AL360270.2-201ENST00000562952 5985 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 RNA5SP335-201ENST00000363817 110 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 MIR143-201ENST00000385300 106 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 OR4K12P-201ENST00000406538 961 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 MTCYBP7-201ENST00000419540 1134 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.62□□□□□ -1.51
HDAC4P56524 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HDAC4P56524 BX510359.3-201ENST00000422168 306 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.62□□□□□ -1.51
HDAC4P56524 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC4P56524 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.62□□□□□ -1.51
HDAC4P56524 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.62□□□□□ -1.51
HDAC4P56524 RN7SL547P-201ENST00000490793 290 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC015864.1-201ENST00000496512 544 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 HMGN1P15-201ENST00000513870 295 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 HMGN1P9-201ENST00000515212 298 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AC016550.3-201ENST00000515706 767 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 RNA5SP362-201ENST00000516048 118 ntBASIC5.62□□□□□ -1.51
HDAC4P56524 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.62□□□□□ -1.51
HDAC4P56524 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.62□□□□□ -1.51
HDAC4P56524 RN7SL356P-201ENST00000582228 248 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms