Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TRY2P-201ENST00000448860 689 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC239798.3-201ENST00000454459 408 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC245100.2-201ENST00000454544 1679 ntBASIC5.61□□□□□ -1.51
VCPP55072 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC109464.1-201ENST00000511091 819 ntBASIC5.61□□□□□ -1.51
VCPP55072 RNA5SP230-201ENST00000517039 122 ntBASIC5.61□□□□□ -1.51
VCPP55072 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 NMNAT1P5-201ENST00000559657 841 ntBASIC5.61□□□□□ -1.51
VCPP55072 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.61□□□□□ -1.51
VCPP55072 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.61□□□□□ -1.51
VCPP55072 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VCPP55072 AC090527.3-201ENST00000619041 548 ntBASIC5.61□□□□□ -1.51
VCPP55072 AC092376.2-201ENST00000622621 4116 ntBASIC5.61□□□□□ -1.51
VCPP55072 MFSD8-216ENST00000641147 4009 ntBASIC5.61□□□□□ -1.51
VCPP55072 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VCPP55072 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.6□□□□□ -1.51
VCPP55072 AL603750.1-201ENST00000624216 1717 ntBASIC5.6□□□□□ -1.51
VCPP55072 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
VCPP55072 SAMMSON-213ENST00000641336 1521 ntBASIC5.6□□□□□ -1.51
VCPP55072 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.6□□□□□ -1.51
VCPP55072 OR1L6-202ENST00000373684 1044 ntBASIC5.6□□□□□ -1.51
VCPP55072 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 COX6B1P1-201ENST00000415962 213 ntBASIC5.6□□□□□ -1.51
VCPP55072 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.6□□□□□ -1.51
VCPP55072 VN1R96P-201ENST00000446052 858 ntBASIC5.6□□□□□ -1.51
VCPP55072 AC239367.2-201ENST00000447309 705 ntBASIC5.6□□□□□ -1.51
VCPP55072 OR52E3P-201ENST00000452083 936 ntBASIC5.6□□□□□ -1.51
VCPP55072 AC020898.1-201ENST00000474167 787 ntBASIC5.6□□□□□ -1.51
VCPP55072 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.6□□□□□ -1.51
VCPP55072 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.6□□□□□ -1.51
VCPP55072 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 OR7H2P-201ENST00000513483 306 ntBASIC5.6□□□□□ -1.51
VCPP55072 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.6□□□□□ -1.51
VCPP55072 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
VCPP55072 AC095055.1-201ENST00000603472 1113 ntBASIC5.6□□□□□ -1.51
VCPP55072 QTRT1P1-201ENST00000604344 1078 ntBASIC5.6□□□□□ -1.51
VCPP55072 AC087468.1-201ENST00000604365 630 ntBASIC5.6□□□□□ -1.51
VCPP55072 AL122125.1-201ENST00000616999 600 ntBASIC5.6□□□□□ -1.51
VCPP55072 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.6□□□□□ -1.51
VCPP55072 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VCPP55072 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.59□□□□□ -1.51
VCPP55072 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VCPP55072 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 Y_RNA.126-201ENST00000363382 111 ntBASIC5.59□□□□□ -1.51
VCPP55072 SNORA70.2-201ENST00000364506 135 ntBASIC5.59□□□□□ -1.51
VCPP55072 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
VCPP55072 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 SNORA79B-201ENST00000410557 148 ntBASIC5.59□□□□□ -1.51
VCPP55072 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.59□□□□□ -1.51
VCPP55072 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC093655.2-201ENST00000425735 631 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC244033.1-201ENST00000426826 870 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.59□□□□□ -1.51
VCPP55072 RPL7P16-201ENST00000479738 738 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC098583.1-201ENST00000480875 255 ntBASIC5.59□□□□□ -1.51
VCPP55072 TRBV8-1-201ENST00000481590 279 ntBASIC5.59□□□□□ -1.51
VCPP55072 RPS12P31-201ENST00000491419 398 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.59□□□□□ -1.51
VCPP55072 AC016559.2-201ENST00000510759 359 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.59□□□□□ -1.51
VCPP55072 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.59□□□□□ -1.51
VCPP55072 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VCPP55072 AL358913.1-201ENST00000554342 121 ntBASIC5.59□□□□□ -1.51
VCPP55072 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.59□□□□□ -1.51
VCPP55072 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.59□□□□□ -1.51
VCPP55072 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.59□□□□□ -1.51
VCPP55072 AC009852.2-201ENST00000567898 485 ntBASIC5.59□□□□□ -1.51
VCPP55072 MTCYBP13-201ENST00000578634 1093 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC006363.1-201ENST00000603806 463 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC073575.2-201ENST00000614212 627 ntBASIC5.59□□□□□ -1.51
VCPP55072 AC091905.4-201ENST00000623432 202 ntBASIC5.59□□□□□ -1.51
VCPP55072 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.59□□□□□ -1.51
VCPP55072 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms