Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC023825.1-201ENST00000566704 1030 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 AP000919.1-202ENST00000581139 1264 ntBASIC5.85□□□□□ -1.47
COPAP53621 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.85□□□□□ -1.47
COPAP53621 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 RMST_10.1-201ENST00000616309 154 ntBASIC5.85□□□□□ -1.47
COPAP53621 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 AC084824.4-201ENST00000620106 731 ntBASIC5.85□□□□□ -1.47
COPAP53621 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 SAMMSON-209ENST00000641222 1100 ntBASIC5.85□□□□□ -1.47
COPAP53621 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.85□□□□□ -1.47
COPAP53621 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COPAP53621 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COPAP53621 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COPAP53621 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
COPAP53621 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 AL159987.1-201ENST00000347911 293 ntBASIC5.84□□□□□ -1.47
COPAP53621 CHMP1B2P-201ENST00000399581 597 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC096533.1-201ENST00000411645 353 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 AC241520.1-201ENST00000422654 1099 ntBASIC5.84□□□□□ -1.47
COPAP53621 PTP4A1P7-201ENST00000423476 514 ntBASIC5.84□□□□□ -1.47
COPAP53621 PNRC2P1-201ENST00000423940 420 ntBASIC5.84□□□□□ -1.47
COPAP53621 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 AC138761.5-201ENST00000433967 325 ntBASIC5.84□□□□□ -1.47
COPAP53621 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.84□□□□□ -1.47
COPAP53621 FMO7P-201ENST00000436045 768 ntBASIC5.84□□□□□ -1.47
COPAP53621 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 AC069540.1-201ENST00000446320 988 ntBASIC5.84□□□□□ -1.47
COPAP53621 NPM1P39-201ENST00000449818 867 ntBASIC5.84□□□□□ -1.47
COPAP53621 CYCSP42-201ENST00000450823 238 ntBASIC5.84□□□□□ -1.47
COPAP53621 CALM1P2-201ENST00000452941 448 ntBASIC5.84□□□□□ -1.47
COPAP53621 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 AL603882.1-201ENST00000463059 681 ntBASIC5.84□□□□□ -1.47
COPAP53621 RPL32P33-201ENST00000487023 394 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC008638.1-201ENST00000506035 866 ntBASIC5.84□□□□□ -1.47
COPAP53621 SUMO2P5-201ENST00000506790 245 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC069306.1-201ENST00000507006 843 ntBASIC5.84□□□□□ -1.47
COPAP53621 GLUD1P3-202ENST00000508551 200 ntBASIC5.84□□□□□ -1.47
COPAP53621 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 SNORA70.11-201ENST00000515987 138 ntBASIC5.84□□□□□ -1.47
COPAP53621 SNORA70.13-201ENST00000516116 138 ntBASIC5.84□□□□□ -1.47
COPAP53621 RN7SKP288-201ENST00000516227 268 ntBASIC5.84□□□□□ -1.47
COPAP53621 RNU6-1308P-201ENST00000516817 103 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC021678.3-201ENST00000517893 476 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC139365.2-201ENST00000517972 253 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.84□□□□□ -1.47
COPAP53621 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.84□□□□□ -1.47
COPAP53621 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.84□□□□□ -1.47
COPAP53621 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.84□□□□□ -1.47
COPAP53621 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 OR7E18P-201ENST00000592589 702 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.84□□□□□ -1.47
COPAP53621 AL137072.1-201ENST00000603444 466 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC012557.1-201ENST00000607115 611 ntBASIC5.84□□□□□ -1.47
COPAP53621 OR7A19P-201ENST00000608051 733 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC079395.2-201ENST00000610982 737 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC008115.3-201ENST00000614874 549 ntBASIC5.84□□□□□ -1.47
COPAP53621 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.84□□□□□ -1.47
COPAP53621 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 AC005618.4-201ENST00000625053 554 ntBASIC5.84□□□□□ -1.47
COPAP53621 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COPAP53621 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COPAP53621 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.84□□□□□ -1.47
COPAP53621 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
COPAP53621 YES1P1-201ENST00000418510 1628 ntBASIC5.84□□□□□ -1.47
COPAP53621 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COPAP53621 CASC19-281ENST00000642118 1554 ntBASIC5.84□□□□□ -1.48
COPAP53621 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.84□□□□□ -1.48
COPAP53621 AC130304.1-201ENST00000622942 2385 ntBASIC5.84□□□□□ -1.48
COPAP53621 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COPAP53621 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
COPAP53621 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
COPAP53621 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COPAP53621 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms