Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC136428.4-201ENST00000634254 1155 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CX3CR1P49238 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.49□□□□□ -1.69
CX3CR1P49238 CASC19-221ENST00000641309 1382 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.49□□□□□ -1.69
CX3CR1P49238 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CX3CR1P49238 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
CX3CR1P49238 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 NEAT1-202ENST00000501122 22743 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AL356317.1-201ENST00000396110 1436 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 KARSP1-201ENST00000451871 1752 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CX3CR1P49238 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 RN7SKP15-201ENST00000364742 309 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CX3CR1P49238 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CR1P49238 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 U3.32-201ENST00000408116 212 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 RCC2P2-201ENST00000422174 918 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 EI24P4-201ENST00000423683 1078 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 COX6CP13-201ENST00000428703 226 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 RPL7L1P9-201ENST00000431298 745 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 UBE2V2P1-201ENST00000434717 398 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AL133244.1-201ENST00000456007 258 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 SETP20-201ENST00000457046 852 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CR1P49238 SEPT7P6-201ENST00000469999 1143 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AC005412.2-201ENST00000492004 341 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AL136038.1-201ENST00000497246 351 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CR1P49238 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 RN7SKP46-201ENST00000515942 234 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AC233702.9-201ENST00000581528 203 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.48□□□□□ -1.69
CX3CR1P49238 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CX3CR1P49238 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.48□□□□□ -1.69
CX3CR1P49238 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CX3CR1P49238 AC015871.5-202ENST00000623252 701 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 NXF4-202ENST00000416098 1465 ntBASIC4.48□□□□□ -1.69
CX3CR1P49238 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.48□□□□□ -1.69
CX3CR1P49238 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
CX3CR1P49238 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC235565.1-201ENST00000456962 1325 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 VPS35P1-201ENST00000563400 1518 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CX3CR1P49238 RNA5SP132-201ENST00000364725 118 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 MIR143-201ENST00000385300 106 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 OOSP1-201ENST00000398992 1270 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 AC013429.2-201ENST00000418798 781 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 OR5M12P-201ENST00000423388 929 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC012519.1-201ENST00000424588 610 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC108075.1-201ENST00000424692 529 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 RPS4XP16-201ENST00000427198 791 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.47□□□□□ -1.69
CX3CR1P49238 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.47□□□□□ -1.69
CX3CR1P49238 MRPL35P2-201ENST00000448009 511 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CX3CR1P49238 RN7SL443P-201ENST00000464331 290 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 SIAH1P1-201ENST00000479411 923 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 RPL5P22-201ENST00000480199 884 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC108693.1-201ENST00000496068 432 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC011411.1-201ENST00000509592 876 ntBASIC4.47□□□□□ -1.69
CX3CR1P49238 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.47□□□□□ -1.69
CX3CR1P49238 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms