Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.03□□□□□ -1.6
SOX2P48431 AC096921.1-201ENST00000411661 375 ntBASIC5.03□□□□□ -1.6
SOX2P48431 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 VTA1P1-201ENST00000414044 866 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 RPL7AP51-201ENST00000422016 760 ntBASIC5.03□□□□□ -1.6
SOX2P48431 OR5M12P-201ENST00000423388 929 ntBASIC5.03□□□□□ -1.6
SOX2P48431 OR10T1P-201ENST00000424327 947 ntBASIC5.03□□□□□ -1.6
SOX2P48431 RPS27AP6-201ENST00000427962 448 ntBASIC5.03□□□□□ -1.6
SOX2P48431 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.03□□□□□ -1.6
SOX2P48431 BMS1P10-201ENST00000443754 1120 ntBASIC5.03□□□□□ -1.6
SOX2P48431 MTCYBP42-201ENST00000444653 1130 ntBASIC5.03□□□□□ -1.6
SOX2P48431 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 AC112492.1-201ENST00000449607 712 ntBASIC5.03□□□□□ -1.6
SOX2P48431 RPS7P10-201ENST00000464254 603 ntBASIC5.03□□□□□ -1.6
SOX2P48431 RN7SL269P-201ENST00000467795 305 ntBASIC5.03□□□□□ -1.6
SOX2P48431 OR7E22P-201ENST00000478335 1035 ntBASIC5.03□□□□□ -1.6
SOX2P48431 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 AC069528.1-202ENST00000482888 637 ntBASIC5.03□□□□□ -1.6
SOX2P48431 RPS7P6-201ENST00000485777 579 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC018639.1-201ENST00000492994 442 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC008565.1-201ENST00000509046 885 ntBASIC5.03□□□□□ -1.6
SOX2P48431 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 AC138517.1-201ENST00000515724 568 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 DEFB130C-202ENST00000530001 230 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.03□□□□□ -1.6
SOX2P48431 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.03□□□□□ -1.6
SOX2P48431 ATP5F1P7-201ENST00000567330 760 ntBASIC5.03□□□□□ -1.6
SOX2P48431 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 MIR3157-201ENST00000578688 85 ntBASIC5.03□□□□□ -1.6
SOX2P48431 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 AP002884.5-201ENST00000595053 1132 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SOX2P48431 AC145423.1-201ENST00000605712 336 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AL135999.3-201ENST00000610501 812 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC092106.3-201ENST00000611308 722 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AL139099.4-201ENST00000614802 114 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC012676.3-201ENST00000614983 479 ntBASIC5.03□□□□□ -1.6
SOX2P48431 MIR6133-201ENST00000617057 108 ntBASIC5.03□□□□□ -1.6
SOX2P48431 OR1S1-201ENST00000624470 978 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX2P48431 AC073488.3-201ENST00000631611 778 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC073488.6-201ENST00000632293 754 ntBASIC5.03□□□□□ -1.6
SOX2P48431 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.03□□□□□ -1.6
SOX2P48431 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX2P48431 AC073055.1-201ENST00000456901 1621 ntBASIC5.03□□□□□ -1.6
SOX2P48431 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX2P48431 AC007938.2-201ENST00000604666 2634 ntBASIC5.03□□□□□ -1.6
SOX2P48431 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SOX2P48431 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SOX2P48431 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 AC007342.5-201ENST00000571340 2142 ntBASIC5.02□□□□□ -1.61
SOX2P48431 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.02□□□□□ -1.61
SOX2P48431 AC107021.2-201ENST00000567714 2095 ntBASIC5.02□□□□□ -1.61
SOX2P48431 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SOX2P48431 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SOX2P48431 MIR133A2-201ENST00000347538 102 ntBASIC5.02□□□□□ -1.61
SOX2P48431 RNU6-666P-201ENST00000363499 107 ntBASIC5.02□□□□□ -1.61
SOX2P48431 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SOX2P48431 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SOX2P48431 HMGB3P18-201ENST00000406327 590 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC105402.1-201ENST00000413336 545 ntBASIC5.02□□□□□ -1.61
SOX2P48431 RPL35AP3-201ENST00000414680 288 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AL133482.1-201ENST00000415988 498 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 HIGD1AP12-201ENST00000427832 281 ntBASIC5.02□□□□□ -1.61
SOX2P48431 DEFA9P-201ENST00000433042 285 ntBASIC5.02□□□□□ -1.61
SOX2P48431 NPM1P18-201ENST00000434232 732 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC00328-2P-201ENST00000436585 219 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.02□□□□□ -1.61
SOX2P48431 AL353662.1-201ENST00000439099 327 ntBASIC5.02□□□□□ -1.61
SOX2P48431 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 PTENP1-201ENST00000447117 1215 ntBASIC5.02□□□□□ -1.61
SOX2P48431 OR7E116P-201ENST00000448529 957 ntBASIC5.02□□□□□ -1.61
SOX2P48431 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.02□□□□□ -1.61
SOX2P48431 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms