Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 MTCO1P15-201ENST00000529569 1526 ntBASIC6.28□□□□□ -1.4
RFC4P35249 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 Z95114.1-201ENST00000624264 14574 ntBASIC6.28□□□□□ -1.4
RFC4P35249 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.28□□□□□ -1.4
RFC4P35249 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RFC4P35249 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 AC116158.1-201ENST00000560231 2129 ntBASIC6.28□□□□□ -1.4
RFC4P35249 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RFC4P35249 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.4
RFC4P35249 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.27□□□□□ -1.4
RFC4P35249 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 ABCC13-202ENST00000463099 3842 ntBASIC6.27□□□□□ -1.41
RFC4P35249 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.27□□□□□ -1.41
RFC4P35249 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.27□□□□□ -1.41
RFC4P35249 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 RSU1P3-201ENST00000412878 835 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC006065.1-201ENST00000422539 802 ntBASIC6.27□□□□□ -1.41
RFC4P35249 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.27□□□□□ -1.41
RFC4P35249 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 AC009238.2-201ENST00000431026 355 ntBASIC6.27□□□□□ -1.41
RFC4P35249 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.27□□□□□ -1.41
RFC4P35249 EIF2S2P2-201ENST00000447161 982 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC020898.1-201ENST00000474167 787 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC013356.1-201ENST00000489027 564 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC083829.1-201ENST00000503756 657 ntBASIC6.27□□□□□ -1.41
RFC4P35249 NPM1P21-201ENST00000513394 762 ntBASIC6.27□□□□□ -1.41
RFC4P35249 RNU6-1334P-201ENST00000516032 105 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.27□□□□□ -1.41
RFC4P35249 OR5M2P-201ENST00000529003 936 ntBASIC6.27□□□□□ -1.41
RFC4P35249 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.27□□□□□ -1.41
RFC4P35249 AL356218.2-201ENST00000605264 187 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 AC092653.1-201ENST00000608509 531 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AL138960.1-201ENST00000613838 513 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AL121873.1-201ENST00000616013 524 ntBASIC6.27□□□□□ -1.41
RFC4P35249 AC021422.1-201ENST00000621212 473 ntBASIC6.27□□□□□ -1.41
RFC4P35249 CR381572.2-201ENST00000624852 397 ntBASIC6.27□□□□□ -1.41
RFC4P35249 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 NCLP2-201ENST00000416078 1462 ntBASIC6.27□□□□□ -1.41
RFC4P35249 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RFC4P35249 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RFC4P35249 AP000432.2-201ENST00000624164 2048 ntBASIC6.26□□□□□ -1.41
RFC4P35249 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 AC004076.2-201ENST00000620532 3323 ntBASIC6.26□□□□□ -1.41
RFC4P35249 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
RFC4P35249 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 RNU4-39P-201ENST00000362455 127 ntBASIC6.26□□□□□ -1.41
RFC4P35249 Y_RNA.126-201ENST00000363382 111 ntBASIC6.26□□□□□ -1.41
RFC4P35249 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RFC4P35249 AL390316.1-201ENST00000406279 553 ntBASIC6.26□□□□□ -1.41
RFC4P35249 RN7SKP27-201ENST00000410684 333 ntBASIC6.26□□□□□ -1.41
RFC4P35249 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC012519.1-201ENST00000424588 610 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC234779.1-201ENST00000425910 285 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 AC004975.1-201ENST00000428733 208 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC013410.1-201ENST00000436223 1232 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 PPIAP21-201ENST00000464473 501 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC116562.1-201ENST00000485355 781 ntBASIC6.26□□□□□ -1.41
RFC4P35249 SUMO2P4-201ENST00000504193 276 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 AC021733.2-201ENST00000518830 497 ntBASIC6.26□□□□□ -1.41
RFC4P35249 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.26□□□□□ -1.41
RFC4P35249 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC6.26□□□□□ -1.41
RFC4P35249 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 MIR1254-2-201ENST00000579553 63 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 AC007497.1-201ENST00000610421 561 ntBASIC6.26□□□□□ -1.41
RFC4P35249 AC019206.1-201ENST00000621938 425 ntBASIC6.26□□□□□ -1.41
RFC4P35249 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.26□□□□□ -1.41
RFC4P35249 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RFC4P35249 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
RFC4P35249 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RFC4P35249 AL137100.1-201ENST00000556703 1620 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms