Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC6.1□□□□□ -1.43
POLR2AP24928 NMNAT1P1-201ENST00000554095 876 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AC108738.1-201ENST00000603703 237 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AC106052.1-201ENST00000608029 497 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 AL445493.3-201ENST00000619568 477 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 AC091046.3-201ENST00000631455 1574 ntBASIC6.1□□□□□ -1.43
POLR2AP24928 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
POLR2AP24928 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.1□□□□□ -1.43
POLR2AP24928 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
POLR2AP24928 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
POLR2AP24928 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.1□□□□□ -1.43
POLR2AP24928 RNA5SP479-201ENST00000364858 117 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 RNU6-650P-201ENST00000365658 111 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
POLR2AP24928 AL589655.1-201ENST00000405398 482 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 TRGV5P-201ENST00000419915 354 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.09□□□□□ -1.43
POLR2AP24928 AL512637.2-201ENST00000431287 1256 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 VN1R108P-201ENST00000431580 830 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AL137845.2-201ENST00000444292 988 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.09□□□□□ -1.43
POLR2AP24928 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 AC103987.1-201ENST00000473394 348 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.09□□□□□ -1.43
POLR2AP24928 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 MRPS33P2-201ENST00000507850 322 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC093824.1-201ENST00000508796 343 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 TOMM20P2-201ENST00000540082 421 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 AC084759.1-201ENST00000561168 290 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 ZNF971P-201ENST00000562068 1249 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 MIR3667-201ENST00000581025 74 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.09□□□□□ -1.43
POLR2AP24928 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.09□□□□□ -1.43
POLR2AP24928 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
POLR2AP24928 KARSP3-201ENST00000571212 1504 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 LINC02035-201ENST00000610128 5476 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.09□□□□□ -1.43
POLR2AP24928 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 AC107980.1-201ENST00000558671 3355 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 OR4K17-201ENST00000315543 1032 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 LINC02210-201ENST00000444561 288 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 CLIC4P1-201ENST00000453177 535 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 snoU13.1-201ENST00000459157 104 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 PPIAP21-201ENST00000464473 501 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.09□□□□□ -1.43
POLR2AP24928 AC096754.1-201ENST00000508904 818 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.09□□□□□ -1.43
POLR2AP24928 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 snoU109.5-201ENST00000516231 132 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC020937.1-201ENST00000519677 1013 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC6.09□□□□□ -1.43
POLR2AP24928 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 OR8G5-201ENST00000524943 1041 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 GTF2IP11-201ENST00000526931 420 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC136624.4-201ENST00000573044 370 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 AC015849.6-201ENST00000605454 474 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AL121652.1-201ENST00000608851 448 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC092140.2-201ENST00000618027 521 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.09□□□□□ -1.43
POLR2AP24928 AP003497.2-201ENST00000624220 967 ntBASIC6.09□□□□□ -1.43
POLR2AP24928 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
POLR2AP24928 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
POLR2AP24928 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
POLR2AP24928 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.08□□□□□ -1.44
POLR2AP24928 AC140479.2-201ENST00000421567 3130 ntBASIC6.08□□□□□ -1.44
POLR2AP24928 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
POLR2AP24928 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
POLR2AP24928 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.08□□□□□ -1.44
POLR2AP24928 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms