Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 SCARNA11.1-201ENST00000516918 132 ntBASIC8.53□□□□□ -1.04
PTPREP23469 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.53□□□□□ -1.04
PTPREP23469 AC008429.4-201ENST00000521201 182 ntBASIC8.53□□□□□ -1.04
PTPREP23469 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.53□□□□□ -1.04
PTPREP23469 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC8.53□□□□□ -1.04
PTPREP23469 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC8.53□□□□□ -1.04
PTPREP23469 AC018558.5-201ENST00000565840 952 ntBASIC8.53□□□□□ -1.04
PTPREP23469 AC141257.3-201ENST00000572906 215 ntBASIC8.53□□□□□ -1.04
PTPREP23469 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC8.53□□□□□ -1.04
PTPREP23469 AL390240.1-201ENST00000612950 384 ntBASIC8.53□□□□□ -1.04
PTPREP23469 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC8.53□□□□□ -1.04
PTPREP23469 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
PTPREP23469 AC022418.1-201ENST00000624118 445 ntBASIC8.53□□□□□ -1.04
PTPREP23469 SNORA43.5-201ENST00000631270 138 ntBASIC8.53□□□□□ -1.04
PTPREP23469 FLJ42393-201ENST00000623801 2270 ntBASIC8.53□□□□□ -1.04
PTPREP23469 MTND5P27-201ENST00000428871 1720 ntBASIC8.53□□□□□ -1.04
PTPREP23469 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
PTPREP23469 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
PTPREP23469 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.53□□□□□ -1.04
PTPREP23469 AC092447.10-201ENST00000620607 1652 ntBASIC8.53□□□□□ -1.04
PTPREP23469 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
PTPREP23469 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC8.52□□□□□ -1.04
PTPREP23469 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.52□□□□□ -1.04
PTPREP23469 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PTPREP23469 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
PTPREP23469 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.52□□□□□ -1.04
PTPREP23469 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC8.52□□□□□ -1.04
PTPREP23469 NF1P8-201ENST00000415351 1461 ntBASIC8.52□□□□□ -1.05
PTPREP23469 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPREP23469 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 PAH-201ENST00000307000 2466 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 RN7SKP44-201ENST00000363602 316 ntBASIC8.52□□□□□ -1.05
PTPREP23469 Y_RNA.197-201ENST00000364004 102 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RNA5SP238-201ENST00000365464 120 ntBASIC8.52□□□□□ -1.05
PTPREP23469 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 RNU6-1300P-201ENST00000391046 108 ntBASIC8.52□□□□□ -1.05
PTPREP23469 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 NDUFB4P5-201ENST00000415445 361 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RPL34P3-201ENST00000421454 338 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 AL589794.1-201ENST00000424971 390 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 AC244505.2-201ENST00000435089 759 ntBASIC8.52□□□□□ -1.05
PTPREP23469 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 AC005040.1-201ENST00000437783 482 ntBASIC8.52□□□□□ -1.05
PTPREP23469 SKP1P1-201ENST00000438081 489 ntBASIC8.52□□□□□ -1.05
PTPREP23469 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 TCEA1P1-201ENST00000449716 880 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RN7SL180P-201ENST00000466769 294 ntBASIC8.52□□□□□ -1.05
PTPREP23469 GLRXP3-201ENST00000470810 321 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RN7SL392P-201ENST00000473024 299 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RN7SL267P-201ENST00000485107 261 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RPL17P2-201ENST00000491913 451 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RPL23AP80-201ENST00000495605 424 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPREP23469 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.52□□□□□ -1.05
PTPREP23469 HMGB3P15-201ENST00000507326 574 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 RNA5SP401-201ENST00000515920 127 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RNU4-49P-201ENST00000516080 140 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RNU6-388P-201ENST00000517012 105 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RNU6-389P-201ENST00000517048 105 ntBASIC8.52□□□□□ -1.05
PTPREP23469 RNU6-789P-201ENST00000517105 102 ntBASIC8.52□□□□□ -1.05
PTPREP23469 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.52□□□□□ -1.05
PTPREP23469 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 AP003084.1-201ENST00000524828 742 ntBASIC8.52□□□□□ -1.05
PTPREP23469 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.52□□□□□ -1.05
PTPREP23469 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 AL109766.1-201ENST00000555080 552 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC8.52□□□□□ -1.05
PTPREP23469 RN7SL32P-201ENST00000580514 281 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC005357.1-201ENST00000588399 301 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC007938.3-201ENST00000604965 623 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC021646.1-201ENST00000605469 484 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AP000654.2-201ENST00000605633 586 ntBASIC8.52□□□□□ -1.05
PTPREP23469 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.52□□□□□ -1.05
PTPREP23469 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AL732618.1-201ENST00000623251 301 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AL049541.2-201ENST00000626377 555 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AC233280.20-201ENST00000637412 416 ntBASIC8.52□□□□□ -1.05
PTPREP23469 AP000473.2-201ENST00000602659 1537 ntBASIC8.52□□□□□ -1.05
PTPREP23469 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTPREP23469 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms