Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RPL12P17-201ENST00000432393 498 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH3P22223 AZGP1P2-201ENST00000454506 345 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH3P22223 RN7SL346P-201ENST00000491561 294 ntBASIC5.23□□□□□ -1.57
CDH3P22223 COL6A4P2-205ENST00000509855 506 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC109464.1-201ENST00000511091 819 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.23□□□□□ -1.57
CDH3P22223 AC126177.5-201ENST00000549599 178 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.23□□□□□ -1.57
CDH3P22223 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH3P22223 AC012414.2-201ENST00000559474 187 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC005341.1-201ENST00000571086 708 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC027281.1-201ENST00000574178 758 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH3P22223 AC013244.1-201ENST00000604279 193 ntBASIC5.23□□□□□ -1.57
CDH3P22223 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH3P22223 AC010632.3-201ENST00000611377 369 ntBASIC5.23□□□□□ -1.57
CDH3P22223 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CDH3P22223 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.23□□□□□ -1.57
CDH3P22223 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CDH3P22223 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CDH3P22223 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CDH3P22223 AL590763.1-201ENST00000398297 1545 ntBASIC5.23□□□□□ -1.57
CDH3P22223 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 AC005294.1-201ENST00000355509 281 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AL353625.1-202ENST00000366273 571 ntBASIC5.22□□□□□ -1.57
CDH3P22223 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 MIR223-201ENST00000385204 110 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 AC104297.1-201ENST00000393779 870 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH3P22223 ARAFP1-201ENST00000422172 605 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH3P22223 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 MTCO3P43-201ENST00000440974 771 ntBASIC5.22□□□□□ -1.57
CDH3P22223 LINC02210-201ENST00000444561 288 ntBASIC5.22□□□□□ -1.57
CDH3P22223 MORF4L1P4-201ENST00000450245 976 ntBASIC5.22□□□□□ -1.57
CDH3P22223 RPS26P41-201ENST00000450370 284 ntBASIC5.22□□□□□ -1.57
CDH3P22223 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 RN7SL172P-201ENST00000460535 303 ntBASIC5.22□□□□□ -1.57
CDH3P22223 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 AC020779.1-201ENST00000478757 796 ntBASIC5.22□□□□□ -1.57
CDH3P22223 NPM1P29-201ENST00000483112 803 ntBASIC5.22□□□□□ -1.57
CDH3P22223 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 AL049874.2-201ENST00000492636 288 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH3P22223 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
CDH3P22223 HIGD1AP14-201ENST00000507617 282 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AP002373.2-201ENST00000541631 1060 ntBASIC5.22□□□□□ -1.57
CDH3P22223 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.22□□□□□ -1.57
CDH3P22223 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH3P22223 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.22□□□□□ -1.57
CDH3P22223 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 AC091948.2-201ENST00000636510 279 ntBASIC5.22□□□□□ -1.57
CDH3P22223 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 PABPC1P6-201ENST00000445594 1829 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AC000374.1-201ENST00000434698 1745 ntBASIC5.22□□□□□ -1.57
CDH3P22223 AC005332.5-201ENST00000591222 2919 ntBASIC5.22□□□□□ -1.57
CDH3P22223 VPS35P1-201ENST00000563400 1518 ntBASIC5.22□□□□□ -1.57
CDH3P22223 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDH3P22223 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CDH3P22223 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
CDH3P22223 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.22□□□□□ -1.57
CDH3P22223 Z95331.1-201ENST00000623075 23112 ntBASIC5.21□□□□□ -1.57
CDH3P22223 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.21□□□□□ -1.57
CDH3P22223 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH3P22223 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDH3P22223 SNORA67-201ENST00000384423 137 ntBASIC5.21□□□□□ -1.58
CDH3P22223 RNU1-149P-201ENST00000390870 161 ntBASIC5.21□□□□□ -1.58
CDH3P22223 RNA5SP339-201ENST00000390987 122 ntBASIC5.21□□□□□ -1.58
CDH3P22223 HSPA8P15-201ENST00000401676 786 ntBASIC5.21□□□□□ -1.58
CDH3P22223 RN7SKP247-201ENST00000411094 308 ntBASIC5.21□□□□□ -1.58
CDH3P22223 RAB9AP4-201ENST00000415230 609 ntBASIC5.21□□□□□ -1.58
CDH3P22223 OR13Z1P-201ENST00000416141 834 ntBASIC5.21□□□□□ -1.58
CDH3P22223 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH3P22223 NPM1P33-201ENST00000438918 872 ntBASIC5.21□□□□□ -1.58
CDH3P22223 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH3P22223 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH3P22223 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH3P22223 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.21□□□□□ -1.58
CDH3P22223 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.21□□□□□ -1.58
CDH3P22223 AC092754.1-201ENST00000472975 479 ntBASIC5.21□□□□□ -1.58
CDH3P22223 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.21□□□□□ -1.58
CDH3P22223 RPS21P4-201ENST00000487122 248 ntBASIC5.21□□□□□ -1.58
CDH3P22223 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDH3P22223 AC008638.1-201ENST00000506035 866 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms