Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
NEBP20929 PEX12P1-201ENST00000400284 1048 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC1.88□□□□□ -2.11
NEBP20929 CYP4F30P-202ENST00000420048 405 ntBASIC1.88□□□□□ -2.11
NEBP20929 EEF1A1P25-201ENST00000495704 1267 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.88□□□□□ -2.11
NEBP20929 SNORA70D-201ENST00000578836 135 ntBASIC1.88□□□□□ -2.11
NEBP20929 MIR5685-201ENST00000579080 79 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC007998.5-201ENST00000622938 237 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC011503.2-201ENST00000594230 1500 ntBASIC1.88□□□□□ -2.11
NEBP20929 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 AP004607.3-201ENST00000530354 3915 ntBASIC1.88□□□□□ -2.11
NEBP20929 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 OR8F1P-201ENST00000425243 930 ntBASIC1.88□□□□□ -2.11
NEBP20929 AL162151.2-201ENST00000448875 158 ntBASIC1.88□□□□□ -2.11
NEBP20929 SLC25A18P1-201ENST00000449385 454 ntBASIC1.88□□□□□ -2.11
NEBP20929 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC1.88□□□□□ -2.11
NEBP20929 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC1.88□□□□□ -2.11
NEBP20929 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 DYNLL1P4-201ENST00000549314 266 ntBASIC1.88□□□□□ -2.11
NEBP20929 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC1.88□□□□□ -2.11
NEBP20929 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 SMG1P6-201ENST00000532337 2930 ntBASIC1.88□□□□□ -2.11
NEBP20929 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 MFSD8-242ENST00000641690 4199 ntBASIC1.88□□□□□ -2.11
NEBP20929 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.88□□□□□ -2.11
NEBP20929 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.88□□□□□ -2.11
NEBP20929 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 RPS3AP14-201ENST00000483907 780 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 AC096720.1-201ENST00000604441 183 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC022726.2-201ENST00000634673 547 ntBASIC1.88□□□□□ -2.11
NEBP20929 CEP170P1-201ENST00000502249 4587 ntBASIC1.88□□□□□ -2.11
NEBP20929 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 MT-RNR2-201ENST00000387347 1559 ntBASIC1.88□□□□□ -2.11
NEBP20929 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 FTX-215ENST00000638681 9771 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 SNORA9.2-201ENST00000365361 133 ntBASIC1.88□□□□□ -2.11
NEBP20929 AL603825.1-201ENST00000438481 80 ntBASIC1.88□□□□□ -2.11
NEBP20929 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 AL451063.1-201ENST00000450164 1133 ntBASIC1.88□□□□□ -2.11
NEBP20929 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC1.88□□□□□ -2.11
NEBP20929 AC105137.1-201ENST00000484355 562 ntBASIC1.88□□□□□ -2.11
NEBP20929 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
NEBP20929 OR4K7P-201ENST00000580232 945 ntBASIC1.88□□□□□ -2.11
NEBP20929 MIR4672-201ENST00000583126 81 ntBASIC1.88□□□□□ -2.11
NEBP20929 CASC22-202ENST00000628396 802 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
NEBP20929 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 Z97832.2-201ENST00000605896 4261 ntBASIC1.87□□□□□ -2.11
NEBP20929 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NEBP20929 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC1.87□□□□□ -2.11
NEBP20929 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC1.87□□□□□ -2.11
NEBP20929 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NEBP20929 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
NEBP20929 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.87□□□□□ -2.11
NEBP20929 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
NEBP20929 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.87□□□□□ -2.11
NEBP20929 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms