Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC007563.3-201ENST00000433233 371 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 RN7SL189P-201ENST00000468631 289 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC034244.2-201ENST00000514668 858 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC027369.5-201ENST00000533838 755 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AL049779.2-201ENST00000553847 315 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC069307.1-201ENST00000602820 447 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC091932.2-201ENST00000623014 291 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 AC136428.4-201ENST00000634254 1155 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HLA-DPA1P20036 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.3□□□□□ -1.56
HLA-DPA1P20036 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 SPATA2P1-201ENST00000431223 2055 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC005522.1-201ENST00000395416 346 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC244453.4-201ENST00000419150 388 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC108075.1-201ENST00000424692 529 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL606490.8-201ENST00000441624 319 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL589765.3-201ENST00000446084 462 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC011225.1-201ENST00000457751 369 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RN7SL629P-201ENST00000489622 285 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL049874.2-201ENST00000492636 288 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RPS4XP20-201ENST00000505751 772 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RNA5SP228-201ENST00000516232 133 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC012400.1-201ENST00000518452 381 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC106730.2-201ENST00000566641 540 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 SUMO2P15-201ENST00000604285 278 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC090527.3-201ENST00000619041 548 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AC008115.4-201ENST00000619780 775 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RPL23AP61-201ENST00000623642 466 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 CYP4F35P-202ENST00000636121 390 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DPA1P20036 AL034549.2-201ENST00000618285 3373 ntBASIC5.29□□□□□ -1.56
HLA-DPA1P20036 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 U3.3-201ENST00000362986 216 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 RNA5SP223-201ENST00000365174 120 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 RNU6-152P-201ENST00000384037 107 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 SNORA68.2-201ENST00000391263 128 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 RPL35AP24-201ENST00000413846 330 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 AL355433.1-201ENST00000422804 300 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.28□□□□□ -1.56
HLA-DPA1P20036 NPM1P19-201ENST00000450070 712 ntBASIC5.28□□□□□ -1.56
HLA-DPA1P20036 AL606490.1-201ENST00000452266 765 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms