Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MIR492-201ENST00000638676 116 ntBASIC8.2□□□□□ -1.1
CFTRP13569 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
CFTRP13569 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CFTRP13569 UGT2B26P-201ENST00000508672 1613 ntBASIC8.2□□□□□ -1.1
CFTRP13569 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 ZNF137P-201ENST00000456718 1920 ntBASIC8.2□□□□□ -1.1
CFTRP13569 AL359955.1-201ENST00000455242 3275 ntBASIC8.2□□□□□ -1.1
CFTRP13569 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
CFTRP13569 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 RN7SKP16-201ENST00000410180 299 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC8.19□□□□□ -1.1
CFTRP13569 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC8.19□□□□□ -1.1
CFTRP13569 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.19□□□□□ -1.1
CFTRP13569 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 AC092709.1-201ENST00000521355 1045 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC8.19□□□□□ -1.1
CFTRP13569 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.19□□□□□ -1.1
CFTRP13569 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
CFTRP13569 AC006130.2-201ENST00000586202 326 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AL591034.3-201ENST00000605511 685 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AL162574.1-201ENST00000615702 950 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC243960.7-201ENST00000623532 707 ntBASIC8.19□□□□□ -1.1
CFTRP13569 SOCS5P3-201ENST00000425115 1576 ntBASIC8.19□□□□□ -1.1
CFTRP13569 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC8.19□□□□□ -1.1
CFTRP13569 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
CFTRP13569 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
CFTRP13569 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 PRNCR1-201ENST00000635449 12727 ntBASIC8.19□□□□□ -1.1
CFTRP13569 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.19□□□□□ -1.1
CFTRP13569 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CFTRP13569 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.19□□□□□ -1.1
CFTRP13569 NDUFA5P1-201ENST00000433858 341 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC023271.1-201ENST00000445936 1090 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC114755.5-201ENST00000447760 831 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC023424.1-201ENST00000496058 459 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC8.19□□□□□ -1.1
CFTRP13569 AC021193.1-201ENST00000511607 420 ntBASIC8.19□□□□□ -1.1
CFTRP13569 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC8.19□□□□□ -1.1
CFTRP13569 RN7SL652P-201ENST00000577769 300 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC007786.3-201ENST00000615154 596 ntBASIC8.19□□□□□ -1.1
CFTRP13569 AC107068.1-201ENST00000563286 4218 ntBASIC8.19□□□□□ -1.1
CFTRP13569 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
CFTRP13569 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
CFTRP13569 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
CFTRP13569 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.18□□□□□ -1.1
CFTRP13569 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
CFTRP13569 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
CFTRP13569 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC8.18□□□□□ -1.1
CFTRP13569 AL451142.1-201ENST00000375867 775 ntBASIC8.18□□□□□ -1.1
CFTRP13569 RNA5SP241-201ENST00000391326 114 ntBASIC8.18□□□□□ -1.1
CFTRP13569 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
CFTRP13569 ACTR3P2-201ENST00000439585 1257 ntBASIC8.18□□□□□ -1.1
CFTRP13569 AC073052.1-201ENST00000440417 714 ntBASIC8.18□□□□□ -1.1
CFTRP13569 snoU13.22-201ENST00000459428 104 ntBASIC8.18□□□□□ -1.1
CFTRP13569 RN7SKP67-201ENST00000515905 235 ntBASIC8.18□□□□□ -1.1
CFTRP13569 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
CFTRP13569 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC8.18□□□□□ -1.1
CFTRP13569 AC011477.5-201ENST00000586571 259 ntBASIC8.18□□□□□ -1.1
CFTRP13569 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8.18□□□□□ -1.1
CFTRP13569 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.18□□□□□ -1.1
CFTRP13569 U3.53-201ENST00000628922 216 ntBASIC8.18□□□□□ -1.1
CFTRP13569 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
CFTRP13569 CASC19-255ENST00000641733 1385 ntBASIC8.18□□□□□ -1.1
CFTRP13569 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.17□□□□□ -1.1
CFTRP13569 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.17□□□□□ -1.1
CFTRP13569 AC021146.4-201ENST00000309229 279 ntBASIC8.17□□□□□ -1.1
CFTRP13569 AL121657.1-201ENST00000327215 531 ntBASIC8.17□□□□□ -1.1
CFTRP13569 AC007618.1-201ENST00000366455 732 ntBASIC8.17□□□□□ -1.1
CFTRP13569 AL359837.1-201ENST00000381357 287 ntBASIC8.17□□□□□ -1.1
CFTRP13569 RNA5SP171-201ENST00000391071 115 ntBASIC8.17□□□□□ -1.1
CFTRP13569 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.17□□□□□ -1.1
CFTRP13569 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.17□□□□□ -1.1
CFTRP13569 snoU13.29-201ENST00000459370 104 ntBASIC8.17□□□□□ -1.1
CFTRP13569 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC8.17□□□□□ -1.1
CFTRP13569 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC8.17□□□□□ -1.1
CFTRP13569 AC025857.2-201ENST00000602711 238 ntBASIC8.17□□□□□ -1.1
CFTRP13569 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.17□□□□□ -1.1
CFTRP13569 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.17□□□□□ -1.1
CFTRP13569 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CFTRP13569 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CFTRP13569 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CFTRP13569 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CFTRP13569 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms