Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 COX6B1P3-201ENST00000312310 260 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 RNU6-660P-201ENST00000364566 109 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
HOXD8P13378 RNU6-876P-201ENST00000391295 104 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 RN7SKP56-201ENST00000410513 331 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
HOXD8P13378 MTND1P28-201ENST00000435623 950 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 Z99127.3-201ENST00000448158 395 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC009963.3-201ENST00000458090 486 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.14□□□□□ -1.27
HOXD8P13378 CYP4F27P-201ENST00000514557 494 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 SNORA81.2-201ENST00000516868 170 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 RN7SKP35-201ENST00000517210 151 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.14□□□□□ -1.27
HOXD8P13378 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.14□□□□□ -1.27
HOXD8P13378 NANOGNBP2-201ENST00000544753 553 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC004217.3-201ENST00000551552 878 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.14□□□□□ -1.27
HOXD8P13378 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.14□□□□□ -1.27
HOXD8P13378 AC068020.1-201ENST00000594215 661 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AC130352.1-201ENST00000602979 661 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AP000907.4-201ENST00000604143 237 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 AC104458.1-201ENST00000608243 463 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
HOXD8P13378 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
HOXD8P13378 DUXAP9-208ENST00000622815 614 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.14□□□□□ -1.27
HOXD8P13378 TSHZ2-205ENST00000626626 670 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
HOXD8P13378 CLCA3P-203ENST00000490028 2781 ntBASIC7.14□□□□□ -1.27
HOXD8P13378 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 EPS15P1-202ENST00000459691 2071 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 PABPC1P9-201ENST00000426076 1612 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 AL391261.1-201ENST00000555712 1479 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC010624.4-201ENST00000597606 1351 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 OR9G4-201ENST00000302957 984 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
HOXD8P13378 RN7SKP226-201ENST00000364912 300 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 SNORA51.9-201ENST00000384295 124 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 Y_RNA.582-201ENST00000391023 95 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AL023284.3-201ENST00000407767 334 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AC138393.2-201ENST00000414742 246 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 RPL21P32-201ENST00000419877 477 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AC066692.1-201ENST00000421721 457 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC115283.1-201ENST00000427353 400 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXD8P13378 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXD8P13378 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC094085.1-201ENST00000468914 584 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 MTND6P6-201ENST00000478031 263 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXD8P13378 ARL4AP2-201ENST00000507378 601 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AC002456.2-201ENST00000509356 380 ntBASIC7.13□□□□□ -1.27
HOXD8P13378 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.13□□□□□ -1.27
HOXD8P13378 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXD8P13378 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms