Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RB1P06400 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RB1P06400 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RB1P06400 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RB1P06400 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 NXF4-202ENST00000416098 1465 ntBASIC5.65□□□□□ -1.5
RB1P06400 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 U3.3-201ENST00000362986 216 ntBASIC5.65□□□□□ -1.5
RB1P06400 RNU1-146P-201ENST00000364015 165 ntBASIC5.65□□□□□ -1.5
RB1P06400 MIR1182-201ENST00000408363 97 ntBASIC5.65□□□□□ -1.5
RB1P06400 OR2AM1P-201ENST00000422137 422 ntBASIC5.65□□□□□ -1.5
RB1P06400 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RB1P06400 OR10T1P-201ENST00000424327 947 ntBASIC5.65□□□□□ -1.5
RB1P06400 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.65□□□□□ -1.5
RB1P06400 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.65□□□□□ -1.5
RB1P06400 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 MTND4LP7-201ENST00000431728 294 ntBASIC5.65□□□□□ -1.5
RB1P06400 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 AL691517.1-201ENST00000440833 1235 ntBASIC5.65□□□□□ -1.5
RB1P06400 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 AC011753.3-201ENST00000443436 406 ntBASIC5.65□□□□□ -1.5
RB1P06400 AC104634.1-201ENST00000452720 462 ntBASIC5.65□□□□□ -1.5
RB1P06400 RPL12P39-201ENST00000455456 496 ntBASIC5.65□□□□□ -1.5
RB1P06400 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 snoU13.29-201ENST00000459370 104 ntBASIC5.65□□□□□ -1.5
RB1P06400 LARP7P4-201ENST00000481075 878 ntBASIC5.65□□□□□ -1.5
RB1P06400 OR11I1P-201ENST00000486033 954 ntBASIC5.65□□□□□ -1.5
RB1P06400 RNU6-889P-201ENST00000517189 103 ntBASIC5.65□□□□□ -1.5
RB1P06400 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
RB1P06400 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.65□□□□□ -1.5
RB1P06400 MTND2P13-201ENST00000577438 1039 ntBASIC5.65□□□□□ -1.5
RB1P06400 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.65□□□□□ -1.5
RB1P06400 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.65□□□□□ -1.5
RB1P06400 AC040174.2-201ENST00000602701 465 ntBASIC5.65□□□□□ -1.5
RB1P06400 AL356608.1-201ENST00000610034 820 ntBASIC5.65□□□□□ -1.5
RB1P06400 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.65□□□□□ -1.5
RB1P06400 AC073869.8-201ENST00000641806 335 ntBASIC5.65□□□□□ -1.5
RB1P06400 AL355488.2-201ENST00000609909 2850 ntBASIC5.65□□□□□ -1.5
RB1P06400 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RB1P06400 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RB1P06400 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.65□□□□□ -1.51
RB1P06400 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RB1P06400 KYNUP3-201ENST00000574386 1341 ntBASIC5.65□□□□□ -1.51
RB1P06400 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RB1P06400 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RB1P06400 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.65□□□□□ -1.51
RB1P06400 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
RB1P06400 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RB1P06400 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RB1P06400 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RB1P06400 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.64□□□□□ -1.51
RB1P06400 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 AC068870.1-201ENST00000563737 2455 ntBASIC5.64□□□□□ -1.51
RB1P06400 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 RNU6-1263P-201ENST00000384601 106 ntBASIC5.64□□□□□ -1.51
RB1P06400 DBIP1-201ENST00000401435 260 ntBASIC5.64□□□□□ -1.51
RB1P06400 NPM1P40-201ENST00000412758 733 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.64□□□□□ -1.51
RB1P06400 AL133482.1-201ENST00000415988 498 ntBASIC5.64□□□□□ -1.51
RB1P06400 AL590399.2-201ENST00000427536 309 ntBASIC5.64□□□□□ -1.51
RB1P06400 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 VDAC1P6-201ENST00000430062 855 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 MTND4P15-201ENST00000437913 1033 ntBASIC5.64□□□□□ -1.51
RB1P06400 PRPF38AP2-201ENST00000438179 851 ntBASIC5.64□□□□□ -1.51
RB1P06400 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.64□□□□□ -1.51
RB1P06400 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.64□□□□□ -1.51
RB1P06400 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.64□□□□□ -1.51
RB1P06400 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
RB1P06400 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RB1P06400 AC090058.1-201ENST00000498788 435 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC016550.3-201ENST00000515706 767 ntBASIC5.64□□□□□ -1.51
RB1P06400 RAB9BP1-201ENST00000519581 626 ntBASIC5.64□□□□□ -1.51
RB1P06400 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms