Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC023575.1-201ENST00000580510 358 ntBASIC5.78□□□□□ -1.48
COL4A1P02462 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 AC135352.1-201ENST00000506173 1418 ntBASIC5.78□□□□□ -1.48
COL4A1P02462 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.77□□□□□ -1.48
COL4A1P02462 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
COL4A1P02462 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
COL4A1P02462 AC091046.3-201ENST00000631455 1574 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A1P02462 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A1P02462 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 AL583835.1-201ENST00000399570 407 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 GAPDHP49-201ENST00000421421 961 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 RPS3AP54-201ENST00000435535 734 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 AC009963.2-201ENST00000453431 138 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL4A1P02462 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 IGLVIV-65-201ENST00000517313 360 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A1P02462 FKBP1BP1-201ENST00000553366 325 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A1P02462 AP000843.1-201ENST00000624880 701 ntBASIC5.77□□□□□ -1.49
COL4A1P02462 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
COL4A1P02462 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A1P02462 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A1P02462 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A1P02462 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COL4A1P02462 AC079809.1-201ENST00000415468 276 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A1P02462 MTND2P28-201ENST00000457540 1044 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL4A1P02462 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A1P02462 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A1P02462 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 SNORA74C-1-201ENST00000580726 201 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 MIR3939-201ENST00000582614 106 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 AC114781.5-201ENST00000615297 108 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL4A1P02462 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A1P02462 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.76□□□□□ -1.49
COL4A1P02462 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A1P02462 RNA5SP28-201ENST00000363841 119 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A1P02462 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 RAD23BP1-201ENST00000421404 1227 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A1P02462 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AC245028.2-201ENST00000458673 253 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 PPIAP21-201ENST00000464473 501 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AC021660.1-201ENST00000465006 554 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 MYL12BP2-201ENST00000503948 512 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AC087360.1-201ENST00000518788 616 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A1P02462 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 AC005191.1-201ENST00000603950 358 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AC006338.2-201ENST00000616864 791 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AL049536.1-201ENST00000625043 744 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 PRNCR1-201ENST00000635449 12727 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
COL4A1P02462 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
COL4A1P02462 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A1P02462 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A1P02462 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.75□□□□□ -1.49
COL4A1P02462 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.75□□□□□ -1.49
COL4A1P02462 RPL10P17-201ENST00000453852 316 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.75□□□□□ -1.49
COL4A1P02462 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 AL049830.4-201ENST00000555149 351 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 AL109618.2-201ENST00000605527 211 ntBASIC5.75□□□□□ -1.49
COL4A1P02462 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A1P02462 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
COL4A1P02462 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
COL4A1P02462 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL4A1P02462 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms