Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC093166.4-201ENST00000457867 318 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 RPL35AP28-201ENST00000459730 331 ntBASIC5.22□□□□□ -1.57
LDLRP01130 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 FTH1P2-201ENST00000466086 412 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 AC098583.1-201ENST00000480875 255 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC079841.1-201ENST00000481228 950 ntBASIC5.22□□□□□ -1.57
LDLRP01130 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.22□□□□□ -1.57
LDLRP01130 RPL15P21-201ENST00000495592 567 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC021106.1-201ENST00000509020 1058 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.22□□□□□ -1.57
LDLRP01130 RNA5SP228-201ENST00000516232 133 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC139365.2-201ENST00000517972 253 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 OR5D15P-201ENST00000531671 942 ntBASIC5.22□□□□□ -1.57
LDLRP01130 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.22□□□□□ -1.57
LDLRP01130 CKS1BP1-201ENST00000555221 240 ntBASIC5.22□□□□□ -1.57
LDLRP01130 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 BNIP3P39-201ENST00000601077 554 ntBASIC5.22□□□□□ -1.57
LDLRP01130 RPAP2P1-201ENST00000603626 1168 ntBASIC5.22□□□□□ -1.57
LDLRP01130 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.22□□□□□ -1.57
LDLRP01130 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 AC015722.2-201ENST00000622210 551 ntBASIC5.22□□□□□ -1.57
LDLRP01130 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LDLRP01130 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
LDLRP01130 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LDLRP01130 AC144833.1-201ENST00000567953 4089 ntBASIC5.22□□□□□ -1.57
LDLRP01130 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.22□□□□□ -1.57
LDLRP01130 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
LDLRP01130 AP001002.1-201ENST00000625148 1513 ntBASIC5.22□□□□□ -1.57
LDLRP01130 AC023421.1-201ENST00000590535 1785 ntBASIC5.21□□□□□ -1.57
LDLRP01130 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LDLRP01130 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LDLRP01130 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
LDLRP01130 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LDLRP01130 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
LDLRP01130 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.21□□□□□ -1.57
LDLRP01130 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 AC100757.1-201ENST00000616872 1835 ntBASIC5.21□□□□□ -1.58
LDLRP01130 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 RN7SKP29-201ENST00000410957 272 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 AL357752.1-201ENST00000412817 349 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 MTND2P15-201ENST00000418575 892 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL121878.1-201ENST00000418638 859 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.21□□□□□ -1.58
LDLRP01130 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 RPL19P16-201ENST00000433839 588 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC016772.1-201ENST00000444170 1261 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 VN1R48P-201ENST00000448149 1036 ntBASIC5.21□□□□□ -1.58
LDLRP01130 RPL7AP6-201ENST00000477943 801 ntBASIC5.21□□□□□ -1.58
LDLRP01130 STRADBP1-201ENST00000478954 1281 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.21□□□□□ -1.58
LDLRP01130 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 MYL12BP2-201ENST00000503948 512 ntBASIC5.21□□□□□ -1.58
LDLRP01130 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 NRBF2P4-201ENST00000520874 850 ntBASIC5.21□□□□□ -1.58
LDLRP01130 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 OR4R2P-201ENST00000530815 597 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC134349.2-201ENST00000535136 910 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 LSM3P2-201ENST00000551246 273 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 MTND4LP25-201ENST00000570218 163 ntBASIC5.21□□□□□ -1.58
LDLRP01130 MTCYBP13-201ENST00000578634 1093 ntBASIC5.21□□□□□ -1.58
LDLRP01130 PRPF19P1-201ENST00000584766 898 ntBASIC5.21□□□□□ -1.58
LDLRP01130 SUGT1P3-202ENST00000604259 383 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC010245.2-201ENST00000606908 1167 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL049539.1-201ENST00000611964 459 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC090607.5-201ENST00000615692 224 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AL122125.1-201ENST00000616999 600 ntBASIC5.21□□□□□ -1.58
LDLRP01130 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.21□□□□□ -1.58
LDLRP01130 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.21□□□□□ -1.58
LDLRP01130 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 SAMMSON-213ENST00000641336 1521 ntBASIC5.21□□□□□ -1.58
LDLRP01130 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LDLRP01130 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.21□□□□□ -1.58
LDLRP01130 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LDLRP01130 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms