Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC008115.4-201ENST00000619780 775 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN9O95484 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.87□□□□□ -1.63
CLDN9O95484 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 AL731532.2-201ENST00000623542 1953 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN9O95484 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLDN9O95484 MIR1286-201ENST00000408112 78 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 SNORA77-201ENST00000408716 125 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN9O95484 RPS29P9-201ENST00000440360 171 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 AC245047.2-201ENST00000441060 530 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 KNOP1P3-201ENST00000446933 426 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 BTF3P6-201ENST00000448054 499 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 HMGB1P4-201ENST00000455362 567 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 GYG1P1-201ENST00000460864 698 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 RN7SL629P-201ENST00000489622 285 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 AC010350.1-201ENST00000504908 231 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 RN7SKP260-201ENST00000516907 149 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 AC027308.1-201ENST00000517993 110 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 AP002373.2-201ENST00000541631 1060 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 AC068993.1-201ENST00000546724 589 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
CLDN9O95484 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.86□□□□□ -1.63
CLDN9O95484 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 AC005229.3-201ENST00000603438 323 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 NF1P10-201ENST00000613227 742 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 AL122125.1-201ENST00000616999 600 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 AC133552.1-201ENST00000569988 4007 ntBASIC4.86□□□□□ -1.63
CLDN9O95484 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.86□□□□□ -1.63
CLDN9O95484 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLDN9O95484 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.85□□□□□ -1.63
CLDN9O95484 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CLDN9O95484 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN9O95484 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN9O95484 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLDN9O95484 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-1263P-201ENST00000384601 106 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-1320P-201ENST00000390838 107 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-1269P-201ENST00000391139 107 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 ATP5HP3-201ENST00000396994 486 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 LRRC37BP1-201ENST00000398851 714 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 RPL10P10-201ENST00000403509 664 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 SNORA79B-201ENST00000410557 148 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN9O95484 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN9O95484 QRSL1P2-201ENST00000418582 964 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.85□□□□□ -1.63
CLDN9O95484 OR6C72P-201ENST00000451403 892 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AL691482.1-201ENST00000453255 87 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AL389915.2-201ENST00000454576 441 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-599P-201ENST00000459383 107 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-1193P-201ENST00000459461 107 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC097484.1-201ENST00000471148 389 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC090142.2-201ENST00000483263 416 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CLDN9O95484 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.85□□□□□ -1.63
CLDN9O95484 NPM1P52-201ENST00000518264 846 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC012339.2-201ENST00000523996 453 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.85□□□□□ -1.63
CLDN9O95484 AC025857.1-201ENST00000525252 377 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.85□□□□□ -1.63
CLDN9O95484 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLDN9O95484 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.85□□□□□ -1.63
CLDN9O95484 DUX4L52-201ENST00000549363 777 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC011270.1-201ENST00000558606 583 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 AC051619.2-201ENST00000559063 397 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.85□□□□□ -1.63
CLDN9O95484 RNU6-368P-201ENST00000620928 107 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms