Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 RN7SKP157-201ENST00000516174 282 ntBASIC2.11□□□□□ -2.07
USH2AO75445 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.11□□□□□ -2.07
USH2AO75445 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 AL357559.1-201ENST00000622228 274 ntBASIC2.11□□□□□ -2.07
USH2AO75445 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
USH2AO75445 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
USH2AO75445 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC2.11□□□□□ -2.07
USH2AO75445 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC138907.8-201ENST00000623981 2256 ntBASIC2.1□□□□□ -2.07
USH2AO75445 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
USH2AO75445 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 Y_RNA.510-201ENST00000384511 114 ntBASIC2.1□□□□□ -2.07
USH2AO75445 SCAND3P1-201ENST00000439854 1060 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC2.1□□□□□ -2.07
USH2AO75445 RN7SL188P-201ENST00000469842 285 ntBASIC2.1□□□□□ -2.07
USH2AO75445 SNORA70.24-201ENST00000517233 118 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.1□□□□□ -2.07
USH2AO75445 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC2.1□□□□□ -2.07
USH2AO75445 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.1□□□□□ -2.07
USH2AO75445 AL049839.1-201ENST00000556151 657 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AP001160.4-201ENST00000596971 382 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AL133338.2-201ENST00000604292 736 ntBASIC2.1□□□□□ -2.07
USH2AO75445 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.1□□□□□ -2.07
USH2AO75445 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC2.1□□□□□ -2.07
USH2AO75445 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 LINC00963-202ENST00000419300 9557 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AL137058.3-201ENST00000624531 3099 ntBASIC2.1□□□□□ -2.07
USH2AO75445 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AL451142.1-201ENST00000375867 775 ntBASIC2.1□□□□□ -2.07
USH2AO75445 GAPDHP14-201ENST00000450472 937 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AC079804.1-201ENST00000461922 436 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.1□□□□□ -2.07
USH2AO75445 HSPE1P5-201ENST00000561489 272 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AC053481.4-201ENST00000583164 216 ntBASIC2.1□□□□□ -2.07
USH2AO75445 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 AL391261.4-201ENST00000616012 481 ntBASIC2.1□□□□□ -2.07
USH2AO75445 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC2.1□□□□□ -2.07
USH2AO75445 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
USH2AO75445 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
USH2AO75445 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC2.1□□□□□ -2.07
USH2AO75445 NANOGP10-201ENST00000453325 895 ntBASIC2.1□□□□□ -2.07
USH2AO75445 RPS29P2-201ENST00000479278 136 ntBASIC2.1□□□□□ -2.07
USH2AO75445 RN7SL691P-201ENST00000494487 301 ntBASIC2.1□□□□□ -2.07
USH2AO75445 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.1□□□□□ -2.07
USH2AO75445 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 AC079298.1-201ENST00000625026 1619 ntBASIC2.1□□□□□ -2.07
USH2AO75445 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AC083899.1-201ENST00000454465 3819 ntBASIC2.1□□□□□ -2.07
USH2AO75445 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 AL672167.1-205ENST00000641112 3080 ntBASIC2.1□□□□□ -2.07
USH2AO75445 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USH2AO75445 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC2.1□□□□□ -2.07
USH2AO75445 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms