Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 UBBP2-201ENST00000376781 231 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 MIR600-201ENST00000385007 98 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AL589994.1-201ENST00000404962 340 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 SNORA11.3-201ENST00000408471 128 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 SNORA77-201ENST00000408716 125 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AL138787.1-202ENST00000437804 898 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN2BO60939 AL691482.1-201ENST00000453255 87 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 HMGB1P4-201ENST00000455362 567 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 AC091180.1-201ENST00000462104 372 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN2BO60939 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 RN7SL515P-201ENST00000463999 297 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 OR2AO1P-201ENST00000476497 403 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 RPL7P39-201ENST00000481157 744 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 RN7SL346P-201ENST00000491561 294 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC108693.1-201ENST00000496068 432 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 AC005868.1-201ENST00000536421 331 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC024940.3-201ENST00000538551 316 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN2BO60939 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 AC012146.2-201ENST00000576545 416 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN2BO60939 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN2BO60939 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN2BO60939 SNORA11.6-201ENST00000619030 128 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.77□□□□□ -1.65
SCN2BO60939 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN2BO60939 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SCN2BO60939 RBPJP2-201ENST00000618187 1444 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN2BO60939 CUL4AP1-201ENST00000514750 1863 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN2BO60939 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN2BO60939 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 AC068446.1-201ENST00000556425 1549 ntBASIC4.77□□□□□ -1.65
SCN2BO60939 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN2BO60939 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 RNU6-1263P-201ENST00000384601 106 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 LRRC37BP1-201ENST00000398851 714 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 RPL35AP24-201ENST00000413846 330 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 QRSL1P2-201ENST00000418582 964 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC013470.3-201ENST00000420252 1194 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 OR2AH1P-201ENST00000425717 928 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.76□□□□□ -1.65
SCN2BO60939 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 SPRYD7P1-201ENST00000443861 570 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 HSPE1P22-201ENST00000456856 327 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC016687.1-201ENST00000482574 353 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 HMGB3P16-201ENST00000508037 287 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC106872.4-201ENST00000510050 523 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 RPL7L1P4-201ENST00000513004 707 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.76□□□□□ -1.65
SCN2BO60939 AC012339.2-201ENST00000523996 453 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AP001804.2-201ENST00000533932 910 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AP002373.2-201ENST00000541631 1060 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 CD24P2-201ENST00000565486 219 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 AC233702.9-201ENST00000581528 203 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN2BO60939 FKBP1AP1-201ENST00000594588 318 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 AC095055.1-201ENST00000603472 1113 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 MIR6837-201ENST00000620884 64 ntBASIC4.76□□□□□ -1.65
SCN2BO60939 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SCN2BO60939 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN2BO60939 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN2BO60939 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms