Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 ZNF733P-202ENST00000444809 1573 ntBASIC4.15□□□□□ -1.74
SDCBPO00560 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.15□□□□□ -1.74
SDCBPO00560 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SDCBPO00560 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SDCBPO00560 SNORA66-201ENST00000384792 133 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 MIR223-201ENST00000385204 110 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.15□□□□□ -1.75
SDCBPO00560 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.15□□□□□ -1.75
SDCBPO00560 AC092162.1-201ENST00000432828 434 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 AL354714.3-201ENST00000447284 493 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.15□□□□□ -1.75
SDCBPO00560 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.15□□□□□ -1.75
SDCBPO00560 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.15□□□□□ -1.75
SDCBPO00560 RPS18P6-201ENST00000476880 458 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 UBA52P7-201ENST00000486088 380 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 RN7SL30P-201ENST00000488416 306 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.15□□□□□ -1.75
SDCBPO00560 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.15□□□□□ -1.75
SDCBPO00560 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.15□□□□□ -1.75
SDCBPO00560 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.15□□□□□ -1.75
SDCBPO00560 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.15□□□□□ -1.75
SDCBPO00560 SETP1-201ENST00000556014 845 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.15□□□□□ -1.75
SDCBPO00560 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 OR8G7P-201ENST00000616658 848 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SDCBPO00560 AC004808.2-201ENST00000627965 773 ntBASIC4.15□□□□□ -1.75
SDCBPO00560 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.15□□□□□ -1.75
SDCBPO00560 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SDCBPO00560 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SDCBPO00560 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.14□□□□□ -1.75
SDCBPO00560 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SDCBPO00560 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SDCBPO00560 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 AP000580.1-201ENST00000404439 358 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.14□□□□□ -1.75
SDCBPO00560 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 DDX39BP1-205ENST00000422507 192 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 NMNAT1P2-201ENST00000435192 860 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.14□□□□□ -1.75
SDCBPO00560 SCAND3P1-201ENST00000439854 1060 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SDCBPO00560 PPIAP20-201ENST00000449839 135 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AURKAPS1-201ENST00000451805 1212 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AC016724.1-201ENST00000453215 421 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AL389915.2-201ENST00000454576 441 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AL445433.1-201ENST00000457507 257 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 RPL5P22-201ENST00000480199 884 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.14□□□□□ -1.75
SDCBPO00560 OR4A46P-201ENST00000527255 933 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.14□□□□□ -1.75
SDCBPO00560 AL390334.1-201ENST00000556395 450 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.14□□□□□ -1.75
SDCBPO00560 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.14□□□□□ -1.75
SDCBPO00560 AC104687.2-201ENST00000604442 342 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 IMMP1LP1-201ENST00000605170 488 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 AC019206.1-201ENST00000621938 425 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 AC015660.5-201ENST00000623238 564 ntBASIC4.14□□□□□ -1.75
SDCBPO00560 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.14□□□□□ -1.75
SDCBPO00560 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SDCBPO00560 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 MTND5P12-201ENST00000502851 1449 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
SDCBPO00560 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SDCBPO00560 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 RNA5SP296-201ENST00000410523 111 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 Z68694.1-201ENST00000413929 841 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.13□□□□□ -1.75
SDCBPO00560 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.13□□□□□ -1.75
SDCBPO00560 E2F6P2-201ENST00000420708 748 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AC079355.1-201ENST00000421770 223 ntBASIC4.13□□□□□ -1.75
SDCBPO00560 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms