Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM1O00151 YES1P1-201ENST00000418510 1628 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AC018529.3-201ENST00000624212 2254 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC012020.1-201ENST00000624541 1728 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDLIM1O00151 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 VN1R31P-201ENST00000417498 730 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC106901.1-201ENST00000425086 698 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AC124944.2-201ENST00000429866 1242 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AL391987.1-201ENST00000441025 200 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.98□□□□□ -1.61
PDLIM1O00151 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC023141.9-201ENST00000458734 412 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 HMGN1P8-201ENST00000463578 288 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 SEPT7P6-201ENST00000469999 1143 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC104109.1-201ENST00000498563 436 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 RN7SKP34-201ENST00000516142 244 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 NRBF2P4-201ENST00000520874 850 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AC112191.2-201ENST00000522428 333 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC107918.3-201ENST00000533272 382 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AP001804.2-201ENST00000533932 910 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 MIR4505-201ENST00000582238 73 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC007683.2-201ENST00000624681 714 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 AP003400.3-201ENST00000624904 346 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC008691.1-209ENST00000642094 814 ntBASIC4.98□□□□□ -1.61
PDLIM1O00151 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM1O00151 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM1O00151 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
PDLIM1O00151 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SCN1A-220ENST00000641603 12506 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM1O00151 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM1O00151 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 DBIP1-201ENST00000401435 260 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 AL391422.1-201ENST00000402155 436 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 GAPDHP42-201ENST00000406848 981 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 RN7SKP206-201ENST00000410823 293 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 OR2AT2P-201ENST00000413438 905 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 RPL21P108-201ENST00000413857 481 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM1O00151 EEF1B2P6-201ENST00000445713 673 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 NOP56P2-201ENST00000447491 769 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC108161.1-201ENST00000461060 402 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 RN7SL717P-201ENST00000478343 297 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 RN7SL814P-201ENST00000487715 300 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 RPS24P16-201ENST00000497294 392 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.97□□□□□ -1.61
PDLIM1O00151 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.97□□□□□ -1.61
PDLIM1O00151 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM1O00151 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AC015813.4-201ENST00000610469 179 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AL391597.1-201ENST00000618707 694 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 AC009704.2-201ENST00000618739 483 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 AL390318.1-201ENST00000624564 687 ntBASIC4.97□□□□□ -1.61
PDLIM1O00151 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM1O00151 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms