Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NPIPA2E9PIF3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPIPA2E9PIF3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NPIPA2E9PIF3 AC093775.1-201ENST00000624154 1868 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC087565.3-202ENST00000642085 1603 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RN7SKP145-201ENST00000363291 303 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AL645733.1-201ENST00000402250 217 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RPL5P19-201ENST00000404228 893 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 OR13Z1P-201ENST00000416141 834 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC093084.1-201ENST00000424233 687 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AJ239321.1-201ENST00000424255 564 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 Z85994.2-201ENST00000434327 452 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RSL24D1P2-201ENST00000445584 366 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RPL31P20-201ENST00000449593 360 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 CBX1P5-201ENST00000475330 559 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RPL7P40-201ENST00000481703 745 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 NPM1P29-201ENST00000483112 803 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 SNORA48.9-201ENST00000516419 162 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RN7SKP66-201ENST00000516681 231 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 OR4A46P-201ENST00000527255 933 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AP000769.2-201ENST00000602344 396 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC009027.1-201ENST00000604510 479 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC024940.4-201ENST00000605507 246 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC007620.3-201ENST00000608131 497 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 BNIP3P41-202ENST00000616656 861 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC068870.2-201ENST00000620635 389 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC105105.5-201ENST00000622635 1294 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 SCARNA15-201ENST00000607520 4325 ntBASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NPIPA2E9PIF3 VPS35P1-201ENST00000563400 1518 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC114947.2-201ENST00000565748 2125 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RNU6-670P-201ENST00000364312 104 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RNU1-106P-201ENST00000384382 164 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RN7SKP126-201ENST00000411143 300 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 OR51A6P-201ENST00000418680 1004 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC093162.1-201ENST00000419682 124 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AL136231.1-201ENST00000429407 730 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 CCRL1P1-201ENST00000449542 1053 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC109462.1-201ENST00000491087 368 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 RPS4XP20-201ENST00000505751 772 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 SEPT10P1-201ENST00000517342 1162 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 OR4A43P-201ENST00000532938 908 ntBASIC4.82□□□□□ -1.64
NPIPA2E9PIF3 AP002373.2-201ENST00000541631 1060 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms