Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL627224.1-201ENST00000448334 444 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC021087.2-201ENST00000504656 1203 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 FABP5P6-201ENST00000510588 409 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 SNORD46.2-201ENST00000516021 102 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AP004607.2-201ENST00000533949 322 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC078878.1-201ENST00000539832 958 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC084036.1-201ENST00000609190 508 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 MIR6839-201ENST00000620425 113 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC132068.1-201ENST00000623805 459 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC119674.1-212ENST00000641155 993 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 OR5AC4P-202ENST00000642086 985 ntBASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF103-CHMP3A0A140T963 SMG1P6-201ENST00000532337 2930 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AP001642.1-201ENST00000624727 2117 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL391422.1-201ENST00000402155 436 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL512430.2-201ENST00000406786 339 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AMZ2P2-201ENST00000406819 1057 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC048351.1-201ENST00000420064 602 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 SRSF1P1-201ENST00000424058 520 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 HSPE1P16-201ENST00000426640 348 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL606490.7-201ENST00000433136 191 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC002504.1-201ENST00000438281 691 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 ELOCP10-201ENST00000440624 327 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC105399.1-202ENST00000447303 205 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL157827.1-201ENST00000447622 132 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 RPL7L1P1-201ENST00000448259 785 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL035090.1-201ENST00000454835 332 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC084754.1-201ENST00000463466 464 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC007998.1-201ENST00000474156 672 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC005341.1-201ENST00000571086 708 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC123786.2-201ENST00000603459 275 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 ELOCP34-201ENST00000604436 327 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AP004372.1-201ENST00000604842 844 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC073111.2-201ENST00000605657 1075 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC037198.3-201ENST00000616754 526 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC011447.7-201ENST00000624228 1590 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AC005332.5-201ENST00000591222 2919 ntBASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RNF103-CHMP3A0A140T963 AL022393.1-201ENST00000625142 1677 ntBASIC5.02□□□□□ -1.61
RNF103-CHMP3A0A140T963 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.02□□□□□ -1.61
RNF103-CHMP3A0A140T963 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms