Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 PABPC1P6-201ENST00000445594 1829 ntBASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TRAPPC4Q9Y296 CASC19-221ENST00000641309 1382 ntBASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 AL133268.1-201ENST00000405676 1401 ntBASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 SYT14P1-202ENST00000600441 1448 ntBASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TRAPPC4Q9Y296 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 RNU6-249P-201ENST00000363016 102 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 DUTP5-201ENST00000406790 469 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 EI24P4-201ENST00000423683 1078 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC245047.2-201ENST00000441060 530 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC072052.1-201ENST00000496556 306 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC097173.1-201ENST00000505862 819 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC027308.1-201ENST00000517993 110 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 OR10D4P-201ENST00000525892 951 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MIR4489-201ENST00000578869 62 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MIR1269B-201ENST00000580405 75 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MIR6826-201ENST00000617808 98 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AC099494.2-201ENST00000623371 978 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 SCARNA15-201ENST00000607520 4325 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 CIR1P2-201ENST00000514821 1342 ntBASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TRAPPC4Q9Y296 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 HSPA8P18-201ENST00000439846 1928 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 RN7SKP113-201ENST00000363891 295 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 RN7SKP229-201ENST00000410465 302 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 FABP7P2-201ENST00000429946 379 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 CNOT7P2-201ENST00000441051 832 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC009127.1-201ENST00000467090 155 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC020890.1-201ENST00000491837 504 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC011447.4-201ENST00000587562 111 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 OR8G7P-201ENST00000616658 848 ntBASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
TRAPPC4Q9Y296 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms